Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_N24
(545 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 6.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 6.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 8.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 8.2
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 180 ECLAFLYQLSFSS 142
+C AFL+QLSF++
Sbjct: 117 KCAAFLFQLSFAT 129
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 385 HHVVQHALPALQRVRVQERHVPGLPVRLQRRRHAPR 492
HH +Q+ LQ VQ+ H P + Q++R R
Sbjct: 141 HHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQR 176
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 375 QTEGISADAVRILLHAGLMTRDAEDGS 295
QT ++ + +R + GL RD++DGS
Sbjct: 174 QTLNLTENRLRDINDIGLNRRDSDDGS 200
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 6.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 71 LCRNIPACSSVSVTVRAAAPASPGLLKLSW 160
+ R+I + S + R PAS GLL + +
Sbjct: 458 IARHINSVSYIDKVARIVFPASFGLLNICY 487
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 6.2
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = -3
Query: 279 AGFQFLLLSTPKQVWLFLQHYLHTAERRSLSAAECLAFLYQLSFSSPGEAGAAARTVTLT 100
A FLLLS + + Y H+ R + AE Y S S+ + + + T+ +
Sbjct: 8 AARSFLLLSIASTYVVSVAGYKHSRRHRDFTVAES----YDASSSN---SDSLSMTIPPS 60
Query: 99 LEHAGMFRQSRLHYAHDSRAPSKSDF 22
++ + + +S L + S P S +
Sbjct: 61 IDRSSIHEESYLAESSRSIDPCASKY 86
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 267 FLLLSTPKQVWLFLQHY 217
FLLL+TP V LQ +
Sbjct: 569 FLLLATPTTVTCILQRF 585
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 530 KRTSKCHCLGEAGRGACRRRWSRTGRPGTCRSWTR 426
+RTS CH E R R + G R +R
Sbjct: 225 QRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSR 259
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 267 FLLLSTPKQVWLFLQHY 217
FLLL+TP V LQ +
Sbjct: 659 FLLLATPTTVTCILQRF 675
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,919
Number of Sequences: 438
Number of extensions: 2184
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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