Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_N12
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1458 + 37512954-37513112,37513217-37513324,37513357-375134... 291 3e-79
05_04_0448 - 21349877-21349990,21350263-21350338,21350418-213505... 287 7e-78
03_02_0486 - 8811539-8811610,8811725-8812231,8812327-8812551,881... 240 1e-63
06_03_1034 - 27044892-27044983,27045189-27045216,27045514-270459... 170 9e-43
04_02_0036 - 9033411-9033746,9033961-9034032,9034122-9034222,903... 79 3e-15
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184... 29 3.2
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 29 4.2
12_02_1017 + 25339515-25339548,25339689-25339837,25339932-253399... 28 9.6
02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410 28 9.6
>01_06_1458 +
37512954-37513112,37513217-37513324,37513357-37513431,
37513520-37513581,37513690-37513756,37514161-37514274,
37514357-37514443,37514571-37514641,37514718-37514783,
37514941-37515027,37515127-37515202,37515321-37515424,
37515550-37515583
Length = 369
Score = 291 bits (715), Expect = 3e-79
Identities = 138/243 (56%), Positives = 178/243 (73%), Gaps = 1/243 (0%)
Frame = -2
Query: 782 SSFTTCLLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGD 603
SS TC+LVSEE++ V+ RGKY VCFDP DGSSNI+C VS+G+IF IY K + +
Sbjct: 110 SSGRTCVLVSEEDEEATFVDPALRGKYCVCFDPLDGSSNIDCGVSIGTIFGIYMIKDKEN 169
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPE 423
D L+PG+ +VAAGY +YGS+ +VLS G G VNGF DPS+GEFILT P++KIP+
Sbjct: 170 VTLEDVLQPGKNMVAAGYCMYGSSCTLVLSTGNG--VNGFTLDPSLGEFILTHPDIKIPK 227
Query: 422 KGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGKA-YGARYVGSMVADVHRTIKYGGIFMY 246
KGKIYS+NEG A WD+ ++E K PK G + RY+GSMVADVHRT+ YGG+F+Y
Sbjct: 228 KGKIYSVNEGNAKNWDEPTAKFVEKCKFPKDGSSPKSLRYIGSMVADVHRTLLYGGVFLY 287
Query: 245 PATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDV 66
PA K +PNGKLR+LYE PMSF++ +AGG + GK LD+VP+ IH+R P +LGS +DV
Sbjct: 288 PADKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKIHERSPIFLGSFEDV 347
Query: 65 EEL 57
EE+
Sbjct: 348 EEI 350
>05_04_0448 -
21349877-21349990,21350263-21350338,21350418-21350504,
21350706-21350771,21350855-21350925,21351030-21351116,
21351201-21351314,21351612-21351678,21351807-21351868,
21351960-21352085,21352091-21352381
Length = 386
Score = 287 bits (704), Expect = 7e-78
Identities = 136/243 (55%), Positives = 174/243 (71%), Gaps = 1/243 (0%)
Frame = -2
Query: 782 SSFTTCLLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGD 603
SS TC+LVSEEN+ + V+ RGKY VCFDP DGSSNI+C VS+G+IF IY K + +
Sbjct: 135 SSGRTCVLVSEENEEAIIVDAPLRGKYCVCFDPLDGSSNIDCGVSIGTIFGIYMIKDKDN 194
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPE 423
D L+PG +++AAGY +YGS+ +VLS G G VNGF DPS+GEFILT PN+KIP
Sbjct: 195 VTLDDVLQPGTDMLAAGYCMYGSSCTLVLSTGNG--VNGFTLDPSLGEFILTHPNIKIPN 252
Query: 422 KGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGK-AYGARYVGSMVADVHRTIKYGGIFMY 246
+GKIYS+NEG A WD ++E K P+ G + RY+GSMVADVHRT+ YGGIF+Y
Sbjct: 253 RGKIYSVNEGNAKNWDAPTAKFVEKCKFPQDGSPSKSLRYIGSMVADVHRTLLYGGIFLY 312
Query: 245 PATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDV 66
PA + +PNGKLR+LYE PMSF++ +AGG A GK L++VP IH R P +LGS DV
Sbjct: 313 PADQKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALELVPRKIHDRSPIFLGSYDDV 372
Query: 65 EEL 57
E++
Sbjct: 373 EDI 375
>03_02_0486 -
8811539-8811610,8811725-8812231,8812327-8812551,
8812648-8813064
Length = 406
Score = 240 bits (587), Expect = 1e-63
Identities = 125/257 (48%), Positives = 163/257 (63%), Gaps = 15/257 (5%)
Frame = -2
Query: 782 SSFTTCLLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEG- 606
SS T ++ SEE + VE G Y+V FDP DGSSNI+ VS GSIF IY E
Sbjct: 147 SSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSPNDECL 206
Query: 605 ---------DPVESDAL----KPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSI 465
D VE + +PG L+AAGY +Y S+ + VL++G G V F DP
Sbjct: 207 ADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYV--FTLDPMY 264
Query: 464 GEFILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRP-KTGKAYGARYVGSMVA 288
GEF+LT ++IP+ GKIY+ NEG A WD L+ Y++ K P +GK Y ARY+GS+V
Sbjct: 265 GEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSARYIGSLVG 324
Query: 287 DVHRTIKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSI 108
D HRT+ YGGI+ YP + + NGKLRLLYEC PMSFIV +AGG ++G ILDI+P+ I
Sbjct: 325 DFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIMPTEI 384
Query: 107 HQRVPCYLGSKKDVEEL 57
HQRVP Y+GS ++VE++
Sbjct: 385 HQRVPLYIGSVEEVEKV 401
>06_03_1034 -
27044892-27044983,27045189-27045216,27045514-27045908,
27046224-27046312,27046352-27046620,27047037-27047270
Length = 368
Score = 170 bits (414), Expect = 9e-43
Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 2/238 (0%)
Frame = -2
Query: 764 LLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGDPVESDA 585
++ SEEN + V + YVV DP DGS NIE + G+IF IY + +E D + +
Sbjct: 94 VMASEENHLPIWVSND--SPYVVVTDPLDGSRNIEVSIPTGTIFGIYNRLAELDHLPEEE 151
Query: 584 LKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYS 405
L S T +V S G G G +GF D GEF+LT P+++IP +G+IYS
Sbjct: 152 RAQLNSLQ--------SGTHLVAS-GFGAGTHGFTLDHLTGEFVLTHPSIQIPPRGQIYS 202
Query: 404 INEGYAAEWDKGLQDYIEDKKRPKTG--KAYGARYVGSMVADVHRTIKYGGIFMYPATKS 231
+N+ +W +GL+ YI+ ++ K K Y ARYV S+VAD HRT+ YGG+ M P
Sbjct: 203 VNDARYFDWPEGLRKYIDTIRQGKGQHPKKYSARYVCSLVADFHRTLIYGGVAMNP---- 258
Query: 230 APNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDVEEL 57
LRL+YE NP+SF+ +AGG ++GK IL I P +HQR+P +LG +D+ EL
Sbjct: 259 --RDHLRLVYEANPLSFLAEQAGGRGSDGKSRILSIQPVKLHQRLPLFLGGMEDMLEL 314
>04_02_0036 -
9033411-9033746,9033961-9034032,9034122-9034222,
9034309-9034530,9034832-9034913,9035029-9035214,
9035311-9035445,9035543-9035641
Length = 410
Score = 79.4 bits (187), Expect = 3e-15
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 22/237 (9%)
Frame = -2
Query: 710 GKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSA 531
G + V FDP DGSS ++ +VG+IF ++ GD + G + VAA +YG
Sbjct: 168 GGFSVAFDPLDGSSIVDTNFTVGTIFGVWP----GDKLTGVT---GGDQVAAAMGIYGPR 220
Query: 530 TMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAA----EWDKGLQ 363
T +++L G + F+ G++ I E GK++S A E+DK +
Sbjct: 221 TTYIIALKDCPGTHEFLLLDE-GKWQHVQDTTTIGE-GKMFSPGNLRATFDNPEYDKLIN 278
Query: 362 DYIEDKKRPKTGKAYGARYVGSMVADVHRTI--KYG-----GIFMYP-----------AT 237
Y+++K Y RY G MV DV++ KY G FM T
Sbjct: 279 YYVKEK--------YTLRYTGGMVPDVNQNCYEKYEMPTLMGSFMMQIIVKEKGIFTNVT 330
Query: 236 KSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDV 66
KLRLL+E P+ F++ +AGG +++GK +LD V +++ +R GSK ++
Sbjct: 331 SPTAKAKLRLLFEVAPLGFLIEKAGGYSSDGKQSVLDKVINNLDERTQVAYGSKNEI 387
>07_03_1690 -
28716998-28717091,28717203-28717897,28718264-28718446,
28718552-28719585,28719805-28719978,28720051-28720168,
28720339-28720521,28720647-28720739,28720981-28721166,
28722247-28722507
Length = 1006
Score = 29.5 bits (63), Expect = 3.2
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = -2
Query: 713 RGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGS 534
R KY+ DP S+N+ VS GS + I S G S L +L+ ++G
Sbjct: 316 RPKYLNIIDPIKSSNNLGRSVSKGSFYRIRGAFSFGAQNLSQILMLPTDLIPT--EIFGF 373
Query: 533 ATMMVLSLGKGK----GVNGFMYDPSI---GEFILTDPNMKIPE 423
+ S G+GK G NG ++PS+ E+ L + + + E
Sbjct: 374 FVNTLKSHGRGKRSDVGNNG-SFEPSLDPESEYALWEDSSDVKE 416
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 447 GKNELSYRRVVHEAVHALALSQRQDHHGSRTIQGIARSD 563
G + L+ H H + LS+R + SRTIQG+ + D
Sbjct: 81 GNSPLALALYTHWFYHNIDLSERLNTRKSRTIQGLGKMD 119
>12_02_1017 +
25339515-25339548,25339689-25339837,25339932-25339990,
25340665-25340742,25341155-25341347,25341424-25341454,
25341534-25341592,25341674-25341747,25342228-25342314,
25342353-25342379,25342522-25342583,25342676-25342704,
25343037-25343129
Length = 324
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 692 FDPXDGSSNIECLVSVGSIFAIYKKKSEGDPVESDA-LKPGRELV 561
FDP ++ L GS++A GDPVE+D +KP ++V
Sbjct: 186 FDPSRFLKCLQTLREEGSVYAPSFDHGVGDPVENDIFVKPQHKIV 230
>02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410
Length = 1044
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 161 GLATNGKVPILDIVPSSIHQRVPCYLGSKKDVEEL 57
GL T + LD+ +++H R+P LGS +E +
Sbjct: 137 GLGTLPNLSSLDLTSNNLHGRIPPLLGSSSALESV 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,241,316
Number of Sequences: 37544
Number of extensions: 530837
Number of successful extensions: 1473
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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