Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_N12
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans fructose-1,6-... 358 3e-99
AC006670-1|AAF39910.1| 341|Caenorhabditis elegans Fructose-1,6-... 358 3e-99
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical ... 29 5.0
U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered averme... 28 6.6
U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amin... 28 6.6
>AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans
fructose-1,6-bisphosphatase protein.
Length = 341
Score = 358 bits (880), Expect = 3e-99
Identities = 171/247 (69%), Positives = 195/247 (78%), Gaps = 1/247 (0%)
Frame = -2
Query: 782 SSFTTCLLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGD 603
SS+TTCLLVSEEN +++VE +RRGKY+V FDP DGSSNI+CLVS+G+IF IYKK+ +G
Sbjct: 92 SSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDCLVSIGTIFGIYKKRGDGP 151
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPE 423
D LKPG+E+VAAGYALYGSATM+VLS G GVNGF DPSIGEFILT PNMK E
Sbjct: 152 ATVDDVLKPGKEMVAAGYALYGSATMVVLS--TGDGVNGFTLDPSIGEFILTHPNMKCKE 209
Query: 422 KGKIYSINEGYAAEWDKGLQDYIEDKKRPKTG-KAYGARYVGSMVADVHRTIKYGGIFMY 246
KG IYS+NEGYA W KG +YI +K P+ G KA G RYVGSMVADVHRTI GGIF+Y
Sbjct: 210 KGSIYSLNEGYAQTWSKGFAEYIRTRKYPEAGKKAMGQRYVGSMVADVHRTILNGGIFLY 269
Query: 245 PATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDV 66
P T SAPNGKLRLLYECNPM++I+ +AGGLAT GK ILDI P+ IHQR P LGSK DV
Sbjct: 270 PPTVSAPNGKLRLLYECNPMAYIIEQAGGLATTGKERILDIQPTQIHQRAPIILGSKLDV 329
Query: 65 EELLNXL 45
EE L L
Sbjct: 330 EEALEYL 336
>AC006670-1|AAF39910.1| 341|Caenorhabditis elegans
Fructose-1,6-biphosphatase protein1 protein.
Length = 341
Score = 358 bits (880), Expect = 3e-99
Identities = 171/247 (69%), Positives = 195/247 (78%), Gaps = 1/247 (0%)
Frame = -2
Query: 782 SSFTTCLLVSEENQTVLQVETERRGKYVVCFDPXDGSSNIECLVSVGSIFAIYKKKSEGD 603
SS+TTCLLVSEEN +++VE +RRGKY+V FDP DGSSNI+CLVS+G+IF IYKK+ +G
Sbjct: 92 SSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSNIDCLVSIGTIFGIYKKRGDGP 151
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPE 423
D LKPG+E+VAAGYALYGSATM+VLS G GVNGF DPSIGEFILT PNMK E
Sbjct: 152 ATVDDVLKPGKEMVAAGYALYGSATMVVLS--TGDGVNGFTLDPSIGEFILTHPNMKCKE 209
Query: 422 KGKIYSINEGYAAEWDKGLQDYIEDKKRPKTG-KAYGARYVGSMVADVHRTIKYGGIFMY 246
KG IYS+NEGYA W KG +YI +K P+ G KA G RYVGSMVADVHRTI GGIF+Y
Sbjct: 210 KGSIYSLNEGYAQTWSKGFAEYIRTRKYPEAGKKAMGQRYVGSMVADVHRTILNGGIFLY 269
Query: 245 PATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKKDV 66
P T SAPNGKLRLLYECNPM++I+ +AGGLAT GK ILDI P+ IHQR P LGSK DV
Sbjct: 270 PPTVSAPNGKLRLLYECNPMAYIIEQAGGLATTGKERILDIQPTQIHQRAPIILGSKLDV 329
Query: 65 EELLNXL 45
EE L L
Sbjct: 330 EEALEYL 336
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -2
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMK-IP 426
PV S++L +++ M+VL++ GK V F+Y PS+ +L M+ +P
Sbjct: 53 PVTSNSLNLQNAANEVLHSIISCFMMVVLAVAAGKLVK-FIYTPSLIGCMLVGIAMRNVP 111
Query: 425 EKGKIYSINE 396
+ G+++ INE
Sbjct: 112 QFGELFYINE 121
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 31.1 bits (67), Expect = 0.93
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -2
Query: 602 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMK-IP 426
PV S++L +++ M+VL++ GK V F+Y PS+ +L M+ +P
Sbjct: 53 PVTSNSLNLQNAANEVLHSIISCFMMVVLAVAAGKLVK-FIYTPSLIGCMLVGIAMRNVP 111
Query: 425 EKGKIYSINE 396
+ G+++ INE
Sbjct: 112 QFGELFYINE 121
>AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical
protein M04F3.5 protein.
Length = 652
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 192 PDVVHRDRSGRSGNKWKSSDPGHSAL 115
PD + ++GNKW+SS+ G+S +
Sbjct: 216 PDSAWKQCLAQAGNKWRSSEDGYSCM 241
>U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform a protein.
Length = 416
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 283 CTGL*NTEEYSCIRLPSLLLMESS 212
CT L NT EYSC+R +L E S
Sbjct: 231 CTSLTNTGEYSCLRTRMVLRREFS 254
>U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2A protein.
Length = 416
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 283 CTGL*NTEEYSCIRLPSLLLMESS 212
CT L NT EYSC+R +L E S
Sbjct: 231 CTSLTNTGEYSCLRTRMVLRREFS 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,574,339
Number of Sequences: 27780
Number of extensions: 443012
Number of successful extensions: 1274
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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