Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_N11
         (610 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047465-1|AAH47465.1|  940|Homo sapiens COG1 protein protein.         30   5.5  
BC021985-1|AAH21985.1|  980|Homo sapiens component of oligomeric...    30   5.5  
AB037802-1|BAA92619.1|  961|Homo sapiens KIAA1381 protein protein.     30   5.5  

>BC047465-1|AAH47465.1|  940|Homo sapiens COG1 protein protein.
          Length = 940

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 608 SVISSDKEPIVSAL*XIGTQLESSKASKHENFKNNFDL 495
           S+ SS KE +VSAL  + +   +S ++KH +F+ N  L
Sbjct: 436 SISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSL 473


>BC021985-1|AAH21985.1|  980|Homo sapiens component of oligomeric
           golgi complex 1 protein.
          Length = 980

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 608 SVISSDKEPIVSAL*XIGTQLESSKASKHENFKNNFDL 495
           S+ SS KE +VSAL  + +   +S ++KH +F+ N  L
Sbjct: 436 SISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSL 473


>AB037802-1|BAA92619.1|  961|Homo sapiens KIAA1381 protein protein.
          Length = 961

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -3

Query: 608 SVISSDKEPIVSAL*XIGTQLESSKASKHENFKNNFDL 495
           S+ SS KE +VSAL  + +   +S ++KH +F+ N  L
Sbjct: 435 SISSSSKELLVSALQELESSTSNSPSNKHIHFEYNMSL 472


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,107,523
Number of Sequences: 237096
Number of extensions: 991125
Number of successful extensions: 1413
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)