Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_N07
         (447 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.9  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   4.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.5  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 222  STGATNGVNRPP 257
            STG++N  NRPP
Sbjct: 1627 STGSSNSCNRPP 1638


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 16/64 (25%), Positives = 26/64 (40%)
 Frame = -2

Query: 431 ADDSKTDSCVEESYSKLP*ST**LLYLRIARREQKLKEHGASSCISGKRGRRCCNIWHWG 252
           A   K  S +EE    L   +     + I+R    + E+G +    G     CC +W W 
Sbjct: 37  AKKMKKSSALEELERALTAQSSHTKCIPISRNASAIGENGVA-LKKGLPHVICCRLWRWP 95

Query: 251 SVDS 240
            ++S
Sbjct: 96  DLNS 99


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 148 AGSIVSQLTAAA-MVAPTP*GDAKHHPFSTSLPGSDL 41
           AGS+    +AAA M++ +  G  +H   S+SLP S +
Sbjct: 229 AGSVGGPSSAAAAMLSASSGGQQQHARLSSSLPLSSV 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,668
Number of Sequences: 2352
Number of extensions: 8202
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)