Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_M16
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 49 4e-06
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 49 4e-06
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 49 4e-06
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 34 0.13
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 34 0.13
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 34 0.13
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 34 0.13
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 33 0.17
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 33 0.17
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.68
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40427-3|AAA81469.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 28 8.3
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -1
Query: 761 TNPEAIKSSLSRDGVLTVEAPLPQLAI 681
TNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 80 TNPEQISSTLSTDGVLTVEAPLPQLAI 106
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -1
Query: 761 TNPEAIKSSLSRDGVLTVEAPLPQLAI 681
TNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 177 TNPEQISSTLSTDGVLTVEAPLPQLAI 203
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -1
Query: 761 TNPEAIKSSLSRDGVLTVEAPLPQLAI 681
TNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 191 TNPEQISSTLSTDGVLTVEAPLPQLAI 217
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 107 AVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 137
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 749 AIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 654
A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 106 AVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 367 TSNSTSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSMW 492
TS STST T T T P PTT K + +TT W
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVT--LTTQTW 664
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 367 TSNSTSTVKANVTKATLTRRPCPTTQIGIRKNIN*QITTSMW 492
TS STST T T T P PTT K + +TT W
Sbjct: 625 TSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVT--LTTQTW 664
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 352 QIIIPTSNSTSTVKANVTKATLTRRPCPTT 441
Q IPT+ TST T T+T P PTT
Sbjct: 86 QTTIPTTTPTSTQTTTPTTTTITTTPVPTT 115
>Z48621-4|CAA88542.1| 160|Caenorhabditis elegans Hypothetical
protein R07B1.5 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 361 IPTSNSTSTVKANVTKATLTRRPCPTTQIGI 453
I TS ST+TV T T C T QIGI
Sbjct: 41 IATSTSTTTVTTTTTVVTAACATCTTAQIGI 71
>U40427-3|AAA81469.1| 320|Caenorhabditis elegans Hypothetical
protein F43C9.1 protein.
Length = 320
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 343 VTKMNYNVPFSIHSDGLKKILFIFY*FLTPSSS 245
VT N N+P S HSD LK F + +++ + S
Sbjct: 157 VTVENSNLPISFHSDSLKSAKFDHFRWISSTGS 189
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 755 PEAIKSSLSRDGVLTVEAPLPQ 690
PE+++S L+ DG LT++A P+
Sbjct: 136 PESVQSQLTADGHLTIDAKAPE 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,825,581
Number of Sequences: 27780
Number of extensions: 301025
Number of successful extensions: 714
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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