Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_M15
         (566 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    31   0.58 
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    31   0.58 
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    31   0.58 
AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine re...    27   9.4  
AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical ...    27   9.4  
AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine...    27   9.4  

>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 171 YKIKMKIISHQNAKLSWNILNLTCTNTQYMLRL-IHQYIHINIYPRHSILHFSRY 332
           Y  ++KI   Q   L+W+ +       Q  LRL IHQ    +IY  H IL +  Y
Sbjct: 252 YAHELKIADDQLPNLTWHAIVKRICEAQKKLRLSIHQDNITSIYIYHRILRYKNY 306


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 171 YKIKMKIISHQNAKLSWNILNLTCTNTQYMLRL-IHQYIHINIYPRHSILHFSRY 332
           Y  ++KI   Q   L+W+ +       Q  LRL IHQ    +IY  H IL +  Y
Sbjct: 252 YAHELKIADDQLPNLTWHAIVKRICEAQKKLRLSIHQDNITSIYIYHRILRYKNY 306


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 31.1 bits (67), Expect = 0.58
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 171 YKIKMKIISHQNAKLSWNILNLTCTNTQYMLRL-IHQYIHINIYPRHSILHFSRY 332
           Y  ++KI   Q   L+W+ +       Q  LRL IHQ    +IY  H IL +  Y
Sbjct: 252 YAHELKIADDQLPNLTWHAIVKRICEAQKKLRLSIHQDNITSIYIYHRILRYKNY 306


>AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 66 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 508 LSTNTXLYMTTEYTTDISNACDRHSKPV*QFLYMYNLIRD 389
           LS +  L+   +YT D+  ACD  +  + Q  + Y  +RD
Sbjct: 137 LSDHIVLFEYCKYTVDVPLACDNFNCVINQCFFNYWSLRD 176


>AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.5 protein.
          Length = 639

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 403 YTYIKIVTQAWNDDRTHY 456
           +T++K+  + WND R HY
Sbjct: 445 FTFLKLDDERWNDIRNHY 462


>AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine
           receptor protein 21 protein.
          Length = 469

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 255 YMLRLIHQYIHINIYPRHSILHFSRYFY 338
           +  R + + + + I P HSI H  RY Y
Sbjct: 311 FAFRYLSKILFVRIEPYHSIAHHVRYMY 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,102,507
Number of Sequences: 27780
Number of extensions: 223231
Number of successful extensions: 395
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)