Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_M12
(496 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 42 7e-05
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 36 0.004
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 35 0.006
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 33 0.031
SPBC902.05c |idh2|glu2|isocitrate dehydrogenase |Schizosaccharom... 31 0.072
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 31 0.095
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 30 0.22
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 29 0.29
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 28 0.67
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 0.89
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 27 1.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 1.6
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 26 3.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 4.7
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.3
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 25 6.3
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 25 8.3
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 41.5 bits (93), Expect = 7e-05
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 333 TIIHRLHIQGTRTIIDNLDT-GTSVTPILTGYEGFMDCYNTTIAREGISGLYKGFGALVL 157
TI+ L++ TR L T GTS P Y+GF+DC+ T EG GLYKG +L
Sbjct: 351 TIVFPLNVIRTR-----LQTQGTSAHPAT--YDGFIDCFYKTTKNEGFRGLYKGLSPNLL 403
Query: 156 QLVAHISI 133
++ ++I
Sbjct: 404 KVAPSVAI 411
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 35.5 bits (78), Expect = 0.004
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISIIKLTTIVVT 106
Y+ +DC TI EG LYKGFGA + ++ H +I LT + T
Sbjct: 266 YKNPIDCILKTIRSEGFFALYKGFGAHLARIAPH-TIFCLTFVEQT 310
Score = 27.9 bits (59), Expect = 0.89
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 246 GYEGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISI 133
GY+ + ++ I G+ GL+ G A +L+ V+ S+
Sbjct: 170 GYKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSV 207
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 35.1 bits (77), Expect = 0.006
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVLQLVAH 142
+ G +D Y T +G+ GLY+GFG V+ +V +
Sbjct: 175 FNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVY 208
Score = 32.3 bits (70), Expect = 0.041
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 312 IQGTRTIIDNLDTGTSVTPILTGYEGFMDCYNTTIAREGISGLYKGFGALVLQ 154
I+ + +I N D + Y+G +C+ T A EG+ L++G A VL+
Sbjct: 48 IERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLR 100
Score = 29.5 bits (63), Expect = 0.29
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISIIKL 124
Y +C +A+EG +KG GA +L+ VA ++ +
Sbjct: 270 YSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSI 309
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 32.7 bits (71), Expect = 0.031
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 306 GTRTIIDNLDTGTSVTPIL-TGYEGFMDCYNTTIAREGISGLYKGFGALVLQL 151
G++ I+ +DT + Y+ F DC+ + GI GLY+G +L++
Sbjct: 205 GSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRGLSVSMLKV 257
>SPBC902.05c |idh2|glu2|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 31.5 bits (68), Expect = 0.072
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -2
Query: 342 PVETIIHRLHIQGTRTIIDNLDTGTSVTPI--LTGYEGFMDCYNTTIAREGISGLYKGFG 169
P+ T I + H+ T+ +V P +TGY+ D NT + RE G Y G
Sbjct: 111 PLATPIGKGHVSMNLTLRRTFGLFANVRPCVSITGYKTPYDNVNTVLIRENTEGEYSGIE 170
Query: 168 ALVLQLVAHISIIKLTTIVVTE 103
V+ V + IKL T +E
Sbjct: 171 HEVIPGV--VQSIKLITRAASE 190
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.1 bits (67), Expect = 0.095
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVL 157
Y +DC TI EG GLYKG A +L
Sbjct: 202 YRSSIDCIIKTIRLEGFRGLYKGLSASLL 230
Score = 30.3 bits (65), Expect = 0.17
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISII 130
Y G + C+ +GI GLY G A +L++V + I+
Sbjct: 312 YTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACIL 349
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 29.9 bits (64), Expect = 0.22
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 291 IDNLDTGTSVTPILTGYEGFMDCYNTTIAREGI-SGLYKG 175
+D + T Y G + CY+T + EG+ GLY G
Sbjct: 36 LDTVKTRQQAALYTNKYNGMVKCYSTILCEEGVFHGLYSG 75
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.5 bits (63), Expect = 0.29
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 243 YEGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISIIKLTTIVVTEITNLLKPVKS 73
Y G +DC+ + +E I LY GF A + + H+ V+ +I N L P S
Sbjct: 141 YNGTVDCFTKIVKQERILALYNGFEATMWR---HVVWNAGYFGVIQKIRNSLTPASS 194
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 0.67
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = -2
Query: 264 VTPILTGYEGFMDCYNTTIA-------REGISGLYKGFGALVLQLVAHISI 133
VT I YE + Y T + +EGISG ++GFG L+ H +
Sbjct: 127 VTVIKVRYESNLYSYTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGL 177
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 0.89
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 237 GFMDCYNTTIAREGISGLYKGFGALVLQLVAHISI 133
G + T EGI+GLY+G G ++L + SI
Sbjct: 53 GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSI 87
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 27.1 bits (57), Expect = 1.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 240 EGFMDCYNTTIAREGISGLYKGFGALVLQLVAHISI 133
+GF+ + GI GLY+G A V + A+ +
Sbjct: 144 KGFLQASRIIVHENGIRGLYRGLAATVARQAANSGV 179
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 474 FQQRHRHELSDSYNYSKNVQNPLIEDIN 391
F RHRH+ S ++QN L E IN
Sbjct: 1015 FYSRHRHDRQKIMQLSNSLQNELKEHIN 1042
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 3.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 282 LDTGTSVTPILTGYEGFMDCYNTTIAREGISGLYKG 175
L + ++V+PI Y +DC EG++ YKG
Sbjct: 45 LQSQSNVSPI---YNNALDCVKKISKNEGLAAFYKG 77
Score = 25.8 bits (54), Expect = 3.6
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -2
Query: 372 SFITMEILFYPVETIIHRLHIQGTRTIIDNLDTGTSVTPILTGY--EGFMDCYNTTIARE 199
S + L PVE + RL IQ + ++ + + I + Y G M YN T ARE
Sbjct: 122 SGLANSFLVGPVEHVRIRLQIQTGKNVLYH-GPWDCIKKISSQYGLSGIMKGYNPTAARE 180
Query: 198 --GISGLYKGFGALVLQLVA 145
G+ + + ALV +A
Sbjct: 181 AHGLGMYFLAYEALVKNTMA 200
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 4.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 453 ELSDSYNYSKNVQNPLIED 397
+ SD NYS N++NP +D
Sbjct: 2848 DASDPGNYSNNIENPYTKD 2866
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 297 TIIDNLDTGTSVTPILTGYEGFMDCYNTTIAREGISGLYKG 175
T +D + V P + Y G + + T +++EG+ GLY G
Sbjct: 42 TPLDLIKCRKQVNPNI--YPGNIAGFKTILSKEGLRGLYTG 80
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.0 bits (52), Expect = 6.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 225 CYNTTIAREGISGLYKG 175
C+ + EG+ GLY+G
Sbjct: 56 CFQNAVKNEGLKGLYRG 72
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 24.6 bits (51), Expect = 8.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 149 TSCSTSAPNPLYNPEIPSRAIVV 217
T C+ P PL N ++P + +V+
Sbjct: 286 TLCADKIPRPLLNSKLPRKTLVL 308
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,920,569
Number of Sequences: 5004
Number of extensions: 37390
Number of successful extensions: 106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 194131776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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