Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_M10
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 4.0
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 4.0
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 27 9.2
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 27 9.2
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 27 9.2
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 27 9.2
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 528 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 421
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 528 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 421
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1
Query: 528 CKRSLTVAVQREDVRCASQCDGISVGLVSAPNLYLC 421
C RS VQ E +C+ C G SV +S NL C
Sbjct: 88 CSRSCGGGVQLEKRQCSGDCTGASVRYISC-NLNAC 122
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPFVPLQLNFS 524
+R+ HL H+ THTG P+ N+S
Sbjct: 407 SRSDHLSTHLRTHTGEKPYACPMCNYS 433
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 186 TQLSHLQQHIRTHTGEKPY 204
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 190 TQLSHLQQHIRTHTGEKPY 208
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 186 TQLSHLQQHIRTHTGEKPY 204
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 190 TQLSHLQQHIRTHTGEKPY 208
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 190 TQLSHLQQHIRTHTGEKPY 208
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 186 TQLSHLQQHIRTHTGEKPY 204
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TRARHLYHHIATHTGRLPF 500
T+ HL HI THTG P+
Sbjct: 190 TQLSHLQQHIRTHTGEKPY 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,993,981
Number of Sequences: 27780
Number of extensions: 248647
Number of successful extensions: 639
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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