Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_M09
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0578 - 4296867-4296913,4296927-4297015,4297270-4297394,429...    28   9.1  

>01_01_0578 -
           4296867-4296913,4296927-4297015,4297270-4297394,
           4297476-4297522,4297864-4298222,4298386-4298552,
           4298800-4298846,4299148-4299193,4299586-4299669,
           4300801-4300869
          Length = 359

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +2

Query: 44  SASVPILNLVQGPFSIKQRSSDSKQIPHIKFDRSETSSRLKTSLGMIEKLHY 199
           +AS      VQ   S+     + K++ H+K D    SS L  S     KLHY
Sbjct: 8   AASAAATAAVQCSSSVDNTLDEVKEVVHVKQDAPPPSSFLPNSSVCTYKLHY 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,474,856
Number of Sequences: 37544
Number of extensions: 249624
Number of successful extensions: 434
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)