Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_M06
(780 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p pro... 180 3e-45
AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl pyr... 180 3e-45
AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p pro... 180 3e-45
AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-P... 180 3e-45
AY075463-1|AAL68276.1| 245|Drosophila melanogaster RE18374p pro... 29 5.4
AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-P... 29 5.4
AY069353-1|AAL39498.1| 696|Drosophila melanogaster LD05963p pro... 29 9.5
AE014134-2323|AAF53277.1| 696|Drosophila melanogaster CG6116-PA... 29 9.5
>AY071445-1|AAL49067.1| 419|Drosophila melanogaster RE52884p
protein.
Length = 419
Score = 180 bits (437), Expect = 3e-45
Identities = 91/239 (38%), Positives = 135/239 (56%)
Frame = -3
Query: 772 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXXNFRTNPNYIKMFELFNETLWRTSMGQ 593
RG PCW++ VG+T A D+L+I ++++ +F Y+ + ELF+E + T+ GQ
Sbjct: 182 RGQPCWHKVENVGLT-AINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQ 240
Query: 592 HLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDIC 413
LD + NR S FT++ + LP +L L LA D + ++ ++ I
Sbjct: 241 SLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTIL 298
Query: 412 LEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGS 233
LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV A+QR Q+ + CYG
Sbjct: 299 LEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCYGK 358
Query: 232 SEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNR 56
EPA VER+K LY++L LP Y E+ Y+ I I+ F ++L+ Y R
Sbjct: 359 EEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIYQR 417
>AJ009963-1|CAA08919.1| 380|Drosophila melanogaster farnesyl
pyrophosphate synthase protein.
Length = 380
Score = 180 bits (437), Expect = 3e-45
Identities = 91/239 (38%), Positives = 135/239 (56%)
Frame = -3
Query: 772 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXXNFRTNPNYIKMFELFNETLWRTSMGQ 593
RG PCW++ VG+T A D+L+I ++++ +F Y+ + ELF+E + T+ GQ
Sbjct: 143 RGQPCWHKVENVGLT-AINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQ 201
Query: 592 HLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDIC 413
LD + NR S FT++ + LP +L L LA D + ++ ++ I
Sbjct: 202 SLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTIL 259
Query: 412 LEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGS 233
LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV A+QR Q+ + CYG
Sbjct: 260 LEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCYGK 319
Query: 232 SEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNR 56
EPA VER+K LY++L LP Y E+ Y+ I I+ F ++L+ Y R
Sbjct: 320 EEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIYQR 378
>AF132554-1|AAD27853.1| 419|Drosophila melanogaster GM06581p
protein.
Length = 419
Score = 180 bits (437), Expect = 3e-45
Identities = 91/239 (38%), Positives = 135/239 (56%)
Frame = -3
Query: 772 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXXNFRTNPNYIKMFELFNETLWRTSMGQ 593
RG PCW++ VG+T A D+L+I ++++ +F Y+ + ELF+E + T+ GQ
Sbjct: 182 RGQPCWHKVENVGLT-AINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQ 240
Query: 592 HLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDIC 413
LD + NR S FT++ + LP +L L LA D + ++ ++ I
Sbjct: 241 SLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTIL 298
Query: 412 LEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGS 233
LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV A+QR Q+ + CYG
Sbjct: 299 LEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCYGK 358
Query: 232 SEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNR 56
EPA VER+K LY++L LP Y E+ Y+ I I+ F ++L+ Y R
Sbjct: 359 EEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIYQR 417
>AE013599-1264|AAF58670.1| 419|Drosophila melanogaster CG12389-PA
protein.
Length = 419
Score = 180 bits (437), Expect = 3e-45
Identities = 91/239 (38%), Positives = 135/239 (56%)
Frame = -3
Query: 772 RGMPCWYRRPEVGITCAFXDSLLIHSSLFEFXXXNFRTNPNYIKMFELFNETLWRTSMGQ 593
RG PCW++ VG+T A D+L+I ++++ +F Y+ + ELF+E + T+ GQ
Sbjct: 182 RGQPCWHKVENVGLT-AINDALMIENAMYAILKKHFSHLDCYVALMELFHEITYITTCGQ 240
Query: 592 HLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLGLLLAENVDEKIYKSAQDIC 413
LD + NR S FT++ + LP +L L LA D + ++ ++ I
Sbjct: 241 SLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALALHLAGYKDAEAFRQSKTIL 298
Query: 412 LEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRTVFKACYGS 233
LE+G FQ+QDDF+DCFG+ TGK+GTDIQ+ KC+WLAV A+QR Q+ + CYG
Sbjct: 299 LEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVVAMQRANVEQKQIMVDCYGK 358
Query: 232 SEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKLLDITYNR 56
EPA VER+K LY++L LP Y E+ Y+ I I+ F ++L+ Y R
Sbjct: 359 EEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTSRGVPHQTFLQILNKIYQR 417
>AY075463-1|AAL68276.1| 245|Drosophila melanogaster RE18374p
protein.
Length = 245
Score = 29.5 bits (63), Expect = 5.4
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Frame = -3
Query: 448 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 272
D+ + + A IG FQ+ DD +D + GK D++ T + A ++
Sbjct: 115 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 174
Query: 271 EAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARV 92
E V + SEP VER L H + + K + IR + + +
Sbjct: 175 ELNPMVMRR---FSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQK 231
Query: 91 LFKKLLDITYNR 56
+ + D+ NR
Sbjct: 232 GLQVVADLVINR 243
>AE014297-4727|AAF57135.2| 436|Drosophila melanogaster CG31005-PA
protein.
Length = 436
Score = 29.5 bits (63), Expect = 5.4
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Frame = -3
Query: 448 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 272
D+ + + A IG FQ+ DD +D + GK D++ T + A ++
Sbjct: 306 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 365
Query: 271 EAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARV 92
E V + SEP VER L H + + K + IR + + +
Sbjct: 366 ELNPMVMRR---FSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQK 422
Query: 91 LFKKLLDITYNR 56
+ + D+ NR
Sbjct: 423 GLQVVADLVINR 434
>AY069353-1|AAL39498.1| 696|Drosophila melanogaster LD05963p
protein.
Length = 696
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 345 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 217
+++L +IY NV G QF C H QY+ A N +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465
>AE014134-2323|AAF53277.1| 696|Drosophila melanogaster CG6116-PA
protein.
Length = 696
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 345 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 217
+++L +IY NV G QF C H QY+ A N +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,424,620
Number of Sequences: 53049
Number of extensions: 658109
Number of successful extensions: 1652
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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