Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L23
         (522 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0260 - 21911358-21911438,21911715-21911828,21911911-219120...    29   3.0  

>09_06_0260 -
           21911358-21911438,21911715-21911828,21911911-21912033,
           21912342-21912419,21912498-21912647,21913505-21913601,
           21913679-21913860,21913899-21913982,21914243-21914303,
           21914414-21914506,21914588-21914782,21914937-21915006,
           21915536-21915572,21915654-21915737,21915828-21915885,
           21916008-21916084,21916185-21916244,21916325-21916687
          Length = 668

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = +1

Query: 331 YEQHKVLSDGAQRWS----GGYALRHDIHGTVATARRDVHTKSHSVITSGDESGRSSXEK 498
           Y QHK+     + WS    GGY     + G      RDVH   H+++        S+ E 
Sbjct: 596 YVQHKMAEKAPEIWSIISQGGYIY---VCGDAKGMARDVHRTLHTIVQEQGSLDNSNTES 652

Query: 499 RVRN 510
            V++
Sbjct: 653 YVKS 656


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,864
Number of Sequences: 37544
Number of extensions: 180685
Number of successful extensions: 516
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)