Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L11
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.062
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    27   0.76 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   1.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   5.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 0.062
 Identities = 27/121 (22%), Positives = 43/121 (35%)
 Frame = +3

Query: 330 IPRQFPHHHHGHLPSCVPTEPGFSTGSSLHPHLPSSNCTAERCVARCVKPCIHRVSTHAV 509
           + R    H       CV  E GF T +SL  H+ +   T      RC K C +  +T   
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPH---RC-KHCDNCFTTSGE 197

Query: 510 LPQRALHVQFQALVHRQRRLQEPSLQ*FHPQNRFCSTRRDRP*SCPSCGDLRPPSCRLIS 689
           L +   +       H+       S++    +    +   ++P  CP C    P   +L  
Sbjct: 198 LIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTR 257

Query: 690 H 692
           H
Sbjct: 258 H 258


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 262 KCELNAQQTLLATHALWIVGQIVFLVSFLIITT 360
           K  +  + TL    ++WIVG I+   S L  TT
Sbjct: 187 KPRMGKKATLCVAASIWIVGTIISCPSLLFFTT 219


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect(2) = 1.7
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 345 PHHHHGH 365
           PHHHH H
Sbjct: 502 PHHHHHH 508



 Score = 21.4 bits (43), Expect(2) = 1.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 348 HHHHGHLPS 374
           HHHH H P+
Sbjct: 506 HHHHHHHPT 514


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 262 KCELNAQQTLLATHALWIVGQIVFLVSFLII---TTVTFLLAFQQNQV 396
           +C LN    +L     W+VGQ       L+I   T VT + A   + +
Sbjct: 197 RCLLNIWGVMLFLRLSWVVGQAGIAQGVLLICMTTVVTTITALSMSAI 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,209
Number of Sequences: 2352
Number of extensions: 9061
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)