Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L06
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6E9A Cluster: PREDICTED: similar to CG5195-PA;...    53   9e-06
UniRef50_A3LSH4 Cluster: Glutathione synthetase; n=2; Saccharomy...    38   0.36 
UniRef50_Q8G2M8 Cluster: Transcriptional regulator, TetR family;...    33   5.8  
UniRef50_Q13BP4 Cluster: Aminotransferase, class I and II; n=3; ...    33   5.8  
UniRef50_A7TS98 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_UPI0000DB6E9A Cluster: PREDICTED: similar to CG5195-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG5195-PA
           - Apis mellifera
          Length = 671

 Score = 52.8 bits (121), Expect = 9e-06
 Identities = 33/85 (38%), Positives = 41/85 (48%)
 Frame = -2

Query: 759 EMWDWAXMIKGDLDVLVGAKSAEKDIVVXXXXXXKYLYCHYNETQLRNASLMLNKTVPGR 580
           +MWDWA  +K DL VLVG++ A  +         K L C Y++   R           G 
Sbjct: 590 DMWDWAVQVKNDLHVLVGSQPA--NFETGAAKLRKSLSCTYDDDTYRQIE---QARASGD 644

Query: 579 RPFIKPRELIYANRTWAKYVRESGC 505
           RP  K    +   RTWAKYVRES C
Sbjct: 645 RPSRKGD--LSRTRTWAKYVRESNC 667


>UniRef50_A3LSH4 Cluster: Glutathione synthetase; n=2;
           Saccharomycetaceae|Rep: Glutathione synthetase - Pichia
           stipitis (Yeast)
          Length = 491

 Score = 37.5 bits (83), Expect = 0.36
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = +1

Query: 13  KSKSYKYFSDDERFSCLSYNK*LV*IAET*RFIFDIIRLFTSTCTLILKPKTIESICFEN 192
           KS SYKY+ D+E     S N+    +A+   +  D  +   +    +++P   E  CF+ 
Sbjct: 174 KSYSYKYYDDEEIPVSNSINELADGLADANFYYNDETKNTKTVVLAVVQPG--ERNCFDQ 231

Query: 193 TK*YLTLLDENGIKNYHL-LYVLNSTATISQINFHLLS*FSASFRVYFRGVVSP 351
                +LL  +GIK Y + L  + S  T++    ++ S       VY+R   SP
Sbjct: 232 RHIEYSLLKNHGIKTYRVTLEDVESRTTVNNNKLYIRSTMDEVSVVYYRSGYSP 285


>UniRef50_Q8G2M8 Cluster: Transcriptional regulator, TetR family;
           n=5; Brucella|Rep: Transcriptional regulator, TetR
           family - Brucella suis
          Length = 209

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 624 VEFHYNDSIDIXSSYXLLQRYPFQHSWLQRARLSHP 731
           + FH+ D +DI  S     R+P +   LQ AR  HP
Sbjct: 47  IYFHFEDKLDIFQSIIGRARFPQEEIMLQAARFDHP 82


>UniRef50_Q13BP4 Cluster: Aminotransferase, class I and II; n=3;
           Alphaproteobacteria|Rep: Aminotransferase, class I and
           II - Rhodopseudomonas palustris (strain BisB5)
          Length = 346

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 425 VGILGPFLKSNISATKAMGLNIFTTGSHPDSRTYFAQVLL 544
           VGILGP   S+ +A +A G  +   G+ PD + +F  V+L
Sbjct: 108 VGILGPTYGSHAAAWRAAGAQVHELGALPDPQAHFDVVVL 147


>UniRef50_A7TS98 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 1368

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 163 KTIESICFENTK*YLTLLDENGIKNYHLLYVLNSTATISQINFH 294
           +T   I F   +    LLDEN I  +H  Y+ N   ++S+I+FH
Sbjct: 349 RTFLDIFFTRLQFKYPLLDENEIYEFHDRYIRNDVYSLSEIDFH 392


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,150,002
Number of Sequences: 1657284
Number of extensions: 12401917
Number of successful extensions: 26940
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26938
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)