Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L06
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0327 + 16817149-16817438,16818029-16818224,16818309-168196...    30   1.7  
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    28   9.3  

>07_03_0327 +
           16817149-16817438,16818029-16818224,16818309-16819642,
           16819925-16820097,16820257-16820503,16820599-16820893,
           16820934-16820982,16821357-16821562
          Length = 929

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 1   IVKAKSKSYKYFSDDERFSCLSYN 72
           +++ KS  Y+ FSDD +FSC+  N
Sbjct: 829 LIRNKSGHYREFSDDLKFSCIQLN 852


>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 531  AKYVRESGCEPVVKILRPIALVAEIFDFKNGPK 433
            AK+  E+G  P   IL+P+AL+    D KN  K
Sbjct: 1330 AKWRGENGTVPDTSILKPLALLEGSADLKNQAK 1362


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,836,809
Number of Sequences: 37544
Number of extensions: 299749
Number of successful extensions: 573
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)