Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L06
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160906-1|AAD46846.1|  505|Drosophila melanogaster BcDNA.LD0279...    29   9.1  
AE013599-2704|AAF57684.1|  505|Drosophila melanogaster CG5519-PA...    29   9.1  

>AF160906-1|AAD46846.1|  505|Drosophila melanogaster BcDNA.LD02793
           protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 603 LNKTVPGRRPFIKPRE-LIYANRTWAKYVRESGCEPVV-KILRPIALV 466
           L   VP   P + P    ++  R   KY+ E+GC+P+  K L+P  L+
Sbjct: 7   LTNEVP-ETPVVSPHSGAVFEKRVIEKYLLENGCDPISGKELKPEELI 53


>AE013599-2704|AAF57684.1|  505|Drosophila melanogaster CG5519-PA
           protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 603 LNKTVPGRRPFIKPRE-LIYANRTWAKYVRESGCEPVV-KILRPIALV 466
           L   VP   P + P    ++  R   KY+ E+GC+P+  K L+P  L+
Sbjct: 7   LTNEVP-ETPVVSPHSGAVFEKRVIEKYLLENGCDPISGKELKPEELI 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,413,132
Number of Sequences: 53049
Number of extensions: 552926
Number of successful extensions: 1019
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)