Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L04
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 87  TSPANTVRIAILHFDND 137
           T PA+ V IA L+ DND
Sbjct: 540 TLPASAVGIAWLYVDND 556


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 447 TLITTHVITPKC 482
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 447 TLITTHVITPKC 482
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 447 TLITTHVITPKC 482
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 447 TLITTHVITPKC 482
           T IT H+ TPKC
Sbjct: 475 TWITLHIWTPKC 486


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 422 FNKWNRYLYFNHYT 463
           FNKWN++  +++++
Sbjct: 61  FNKWNQFRSYSNFS 74


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 31  QSKNNLHCTLQHCHTHRP 84
           + K ++H   QH   HRP
Sbjct: 76  KQKEDVHKVFQHLMIHRP 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,626
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)