Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L04
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.6  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 234 YPMNTTNGKR 263
           YP+NTTNG++
Sbjct: 363 YPLNTTNGRK 372


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -2

Query: 598 CKYYRYFVVTTSTLVTNERV*CNYR 524
           C  Y+Y  +  + + +NE + C+ R
Sbjct: 319 CPLYKYLQLIENVIPSNEELICDKR 343


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -2

Query: 598 CKYYRYFVVTTSTLVTNERV*CNYR 524
           C  Y+Y  +  + + +NE + C+ R
Sbjct: 334 CPLYKYLQLIENVIPSNEELICDKR 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,069
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)