Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L03
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   3.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 107 NIYQVLXAFCTXLLMTFSFFGTSVLIGVTSTS 202
           N +  L      L  TF FFGT +L  +   S
Sbjct: 358 NTFAKLLILVVSLSGTFGFFGTHILSYINKAS 389


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 207 KLEVLVTPINTEVPKKENVI 148
           KLE LV  +NTEV    N I
Sbjct: 504 KLETLVHQLNTEVLHLSNAI 523


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 415 PVGDKFDAYKQTPTADIADESMF 483
           P  D  D+ ++TP + ++  SMF
Sbjct: 9   PKRDMLDSQEKTPLSSVSYPSMF 31


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 411 TRTPATAEAXHVVNRMREENILISRD 334
           T+ P       + NR+R +  +++RD
Sbjct: 898 TKQPGMLAYYEICNRIRNQRWIVNRD 923


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 315 LKFKPPMVFTTQDADRLVETL 253
           ++ +PP V+ T    RLV TL
Sbjct: 81  VRVRPPKVYPTPYGGRLVWTL 101


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 315 LKFKPPMVFTTQDADRLVETL 253
           ++ +PP V+ T    RLV TL
Sbjct: 395 VRVRPPKVYPTPYGGRLVWTL 415


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 315 LKFKPPMVFTTQDADRLVETL 253
           ++ +PP V+ T    RLV TL
Sbjct: 628 VRVRPPKVYPTPYGGRLVWTL 648


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 315 LKFKPPMVFTTQDADRLVETL 253
           ++ +PP V+ T    RLV TL
Sbjct: 628 VRVRPPKVYPTPYGGRLVWTL 648


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,643
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)