Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_L03
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 58 6e-09
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 58 6e-09
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 31 0.64
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 31 0.85
U28928-11|AAA68342.3| 824|Caenorhabditis elegans Hypothetical p... 29 2.0
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 28 4.5
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 28 6.0
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 113 bits (271), Expect = 1e-25
Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
Frame = -2
Query: 609 GGNPVSCAIAXAVLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVE 430
GGNPV+CA +V+ V+++ENLLE + ++G L DL+ KH +GD+RG GLF G++
Sbjct: 339 GGNPVACAAVISVMKVVKDENLLEHSQQMGEKLEVALRDLQKKHECIGDIRGVGLFWGID 398
Query: 429 LVTDRETRTPATAEAXHVVNRMREE-NILISRDGPDSNVLKFKPPMVFTTQDADRLVETL 253
LV DR TR P A + +R+ IL++ DGP +N+LK KPP+ F + V L
Sbjct: 399 LVKDRNTREPDQKLAIATILALRKSYGILLNADGPHTNILKIKPPLCFNENNILETVTAL 458
Query: 252 DRVL 241
D+VL
Sbjct: 459 DQVL 462
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 89.0 bits (211), Expect = 2e-18
Identities = 45/119 (37%), Positives = 71/119 (59%)
Frame = -2
Query: 609 GGNPVSCAIAXAVLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVE 430
GGNP++ + AVL+VIEEE L E ++ VG++ L + + +GDVRG+GL +GVE
Sbjct: 321 GGNPLASVVGKAVLEVIEEEKLQENSAVVGDYFLKQLAAI--DDATIGDVRGKGLMIGVE 378
Query: 429 LVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETL 253
L+ D + + A A+ + + + +LI + G NVL+ KPPM T +D D V+ +
Sbjct: 379 LI-DEQGKPLAAAKTAAIFEDTKNQGLLIGKGGIHGNVLRIKPPMCITKKDVDFAVDII 436
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 57.6 bits (133), Expect = 6e-09
Identities = 32/119 (26%), Positives = 67/119 (56%)
Frame = -2
Query: 609 GGNPVSCAIAXAVLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVE 430
GGNP++C +A A L++++EE L+E ++ +G+ L+S+ + L +V VRG+GLF +
Sbjct: 305 GGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKLKTLPKD--IVSTVRGKGLFCAI- 361
Query: 429 LVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETL 253
V +++ +A V +++E +L D +++F PP+ + ++ + +
Sbjct: 362 -VINKK------YDAWKVCLKLKENGLLAKNTHGD--IIRFAPPLCINKEQVEQAADII 411
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 57.6 bits (133), Expect = 6e-09
Identities = 32/119 (26%), Positives = 67/119 (56%)
Frame = -2
Query: 609 GGNPVSCAIAXAVLDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVE 430
GGNP++C +A A L++++EE L+E ++ +G+ L+S+ + L +V VRG+GLF +
Sbjct: 240 GGNPLACKVAIAALEILQEEKLVENSAVMGDLLMSKLKTLPKD--IVSTVRGKGLFCAI- 296
Query: 429 LVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETL 253
V +++ +A V +++E +L D +++F PP+ + ++ + +
Sbjct: 297 -VINKK------YDAWKVCLKLKENGLLAKNTHGD--IIRFAPPLCINKEQVEQAADII 346
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 31.1 bits (67), Expect = 0.64
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = -2
Query: 609 GGNPVSCAIAXAV---LDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFV 439
GGN + IA D +E N ++ A+R + +++G++R R +
Sbjct: 324 GGNSRTLMIACCSPSDSDFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAAL 383
Query: 438 GVELVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVE 259
EL+ ++ R + VVN EN+ ++ + N L+F+ + T D R E
Sbjct: 384 EAELLEFKQGRRTVDVDGHEVVNDQYHENVYLT---SEVNHLRFRVKALNETLDILR-TE 439
Query: 258 TLD 250
+D
Sbjct: 440 NID 442
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 31.1 bits (67), Expect = 0.64
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = -2
Query: 609 GGNPVSCAIAXAV---LDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFV 439
GGN + IA D +E N ++ A+R + +++G++R R +
Sbjct: 324 GGNSRTLMIACCSPSDSDFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAAL 383
Query: 438 GVELVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVE 259
EL+ ++ R + VVN EN+ ++ + N L+F+ + T D R E
Sbjct: 384 EAELLEFKQGRRTVDVDGHEVVNDQYHENVYLT---SEVNHLRFRVKALNETLDILR-TE 439
Query: 258 TLD 250
+D
Sbjct: 440 NID 442
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 31.1 bits (67), Expect = 0.64
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = -2
Query: 609 GGNPVSCAIAXAV---LDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFV 439
GGN + IA D +E N ++ A+R + +++G++R R +
Sbjct: 324 GGNSRTLMIACCSPSDSDFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAAL 383
Query: 438 GVELVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVE 259
EL+ ++ R + VVN EN+ ++ + N L+F+ + T D R E
Sbjct: 384 EAELLEFKQGRRTVDVDGHEVVNDQYHENVYLT---SEVNHLRFRVKALNETLDILR-TE 439
Query: 258 TLD 250
+D
Sbjct: 440 NID 442
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 31.1 bits (67), Expect = 0.64
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = -2
Query: 609 GGNPVSCAIAXAV---LDVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFV 439
GGN + IA D +E N ++ A+R + +++G++R R +
Sbjct: 324 GGNSRTLMIACCSPSDSDFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAAL 383
Query: 438 GVELVTDRETRTPATAEAXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVE 259
EL+ ++ R + VVN EN+ ++ + N L+F+ + T D R E
Sbjct: 384 EAELLEFKQGRRTVDVDGHEVVNDQYHENVYLT---SEVNHLRFRVKALNETLDILR-TE 439
Query: 258 TLD 250
+D
Sbjct: 440 NID 442
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 30.7 bits (66), Expect = 0.85
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = -2
Query: 567 DVIEEENLLERASRVGNHLLSRCEDLKHKHRLVGDVRGRGLFVGVELVTDRETRTPATAE 388
D +E N ++ A+R + +++G++R R + EL+ ++ R +
Sbjct: 345 DFVETLNTMKYANRAKEIKNKVVANQDKSSKMIGELRSRIAALEAELLEFKQGRRTVDVD 404
Query: 387 AXHVVNRMREENILISRDGPDSNVLKFKPPMVFTTQDADRLVETLD 250
VVN EN+ ++ + N L+F+ + T D R E +D
Sbjct: 405 GHEVVNDQYHENVYLT---SEVNHLRFRVKALNETLDILR-TENID 446
>U28928-11|AAA68342.3| 824|Caenorhabditis elegans Hypothetical
protein C44B7.11 protein.
Length = 824
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 131 FCTXLLMTFSFFGTSVLIGVTSTSNLIFDILV--SSNSPKTLSRVSTSLSASCVVNTMGG 304
F T L + SF G ++ I T IF ++ SS +P+ + SA C+V ++GG
Sbjct: 473 FNTILTLILSFPGCAMAIYTTEMLLSIFIPIMGRSSYNPEPAVSFFVAFSAGCIVLSLGG 532
Query: 305 L 307
L
Sbjct: 533 L 533
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +2
Query: 131 FCTXLLMTFSFFGTSVLIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSA 277
FC +SF T++ G T+ +++ D L+ + +P+ L + +T+ +A
Sbjct: 143 FCGLAFALYSFLPTTIWFGFTNEVHILNDTLMRTRNPE-LVKTATNTTA 190
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -2
Query: 498 EDLKHKHRLVGDVRGRGLFVGVELVTDRETRTPATAEAXH 379
E + H +VG G +V V + DRE P + A H
Sbjct: 90 EAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALH 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,225,626
Number of Sequences: 27780
Number of extensions: 234592
Number of successful extensions: 640
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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