Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L03
         (610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    24   1.0  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    24   1.0  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.3  

>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 119 VLXAFCTXLLMTFSFFGTSVLIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSASCVVNTM 298
           VL AFC  +L++     TS+ +   S  +++  I    +S  + + VS  L A  +VN +
Sbjct: 9   VLAAFCVAMLVSDVSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNIL 68


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 119 VLXAFCTXLLMTFSFFGTSVLIGVTSTSNLIFDILVSSNSPKTLSRVSTSLSASCVVNTM 298
           VL AFC  +L++     TS+ +   S  +++  I    +S  + + VS  L A  +VN +
Sbjct: 9   VLAAFCVAMLVSDVSAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNIL 68


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 433 DAYKQTPTADIADESMFMLQIFTPT 507
           D YK TP   +A E MF+ +    T
Sbjct: 137 DKYKPTPLGAVATEKMFVARHLAET 161


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 428 LSPTGKPELPLQLKQXMLSIE*EKKIY*LVVTGPTVTY*SLSPPWCL 288
           LSP        +  +  +S++ +     +V    T TY +L P WCL
Sbjct: 443 LSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCL 489



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -2

Query: 606 GNPVSCAIAXAVLDVIEEENLLERAS 529
           G P S A A           LLERAS
Sbjct: 900 GEPTSAAFAQGFATAASSPGLLERAS 925


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,289
Number of Sequences: 438
Number of extensions: 3385
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)