Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L02
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.53 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.6  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 YVLILT*CHVFGEYYSIISQFSKSLT*IYICNIPII 290
           Y L++   H+F    +I +QFS     IYI + P++
Sbjct: 42  YNLVIRKEHIFERIRTIYNQFSTPYVGIYIFHQPVL 77


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/65 (12%), Positives = 37/65 (56%)
 Frame = +3

Query: 228 SIISQFSKSLT*IYICNIPIINRCIF*LVFIVFCSCSDMTVHASNYHDDILLQNESFYAI 407
           + ++++ +++  +YIC+  ++ R           + +   +H+++ + DI+ ++++ +  
Sbjct: 166 NFVNEYVQAIEVLYICSYTVLIRN-------KISNLNTSLIHSTHLNGDIVKEHQNLHNK 218

Query: 408 LCHIL 422
           +C+++
Sbjct: 219 ICNLI 223


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 588 NSLTCRDDLKWNGHLPSCNVRSWC 517
           N L  RDD  ++  LP C++   C
Sbjct: 361 NELDRRDDPTFDESLPGCHMVDSC 384


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 588 NSLTCRDDLKWNGHLPSCNVRSWC 517
           N L  RDD  ++  LP C++   C
Sbjct: 368 NELDRRDDPTFDESLPGCHMVDSC 391


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 503 GNGGLHHERTLQEGKWPFH 559
           G  GLHH   L     P+H
Sbjct: 35  GLQGLHHSPHLNHAMHPYH 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,677
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)