Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_L02
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   2.7  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 513 PPFPPSHGRISCNGATVSSGRGLKGGSTC 427
           P F PS GR    G    +G G +   TC
Sbjct: 396 PCFDPSRGRAGTVGGNRGAGGGWRSERTC 424



 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 319 SFSVLVLT*QFMRPTTTMTFCY 384
           +FS++    QF+ P   M FCY
Sbjct: 267 TFSIVTSILQFVLPFIIMAFCY 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,176
Number of Sequences: 2352
Number of extensions: 12542
Number of successful extensions: 232
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)