Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_L01
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.6
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 2.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 5.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 7.8
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR KP+ P
Sbjct: 249 RPPHPRLRREAKPEAKP 265
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 53 RPPHPRLRREAEPEAEP 69
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 109 RPPHPRLRREAEPEAEP 125
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 165 RPPHPRLRREAEPEAEP 181
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 193 RPPHPRLRREAEPEAEP 209
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 221 RPPHPRLRREAEPEAEP 237
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR KP+ P
Sbjct: 137 RPPHPRLRREAKPEAEP 153
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 25 RPPHPRLRREAEPEAEP 41
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 53 RPPHPRLRREAEPEAEP 69
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 81 RPPHPRLRREAEPEAEP 97
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 109 RPPHPRLRREAEPEAEP 125
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 165 RPPHPRLRREAEPEAEP 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 498 QRVCSLRQASIRW 460
++VCSLR AS W
Sbjct: 171 RQVCSLRMASYGW 183
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 498 QRVCSLRQASIRW 460
++VCSLR AS W
Sbjct: 171 RQVCSLRMASYGW 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 183 KNHCPLICHP 212
KN+CPL C P
Sbjct: 344 KNNCPLHCKP 353
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 584 RKGVSVRFRNAAY 622
+KGVS+RF N Y
Sbjct: 551 KKGVSLRFYNVVY 563
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 54 RPPHPRLRREAEPEAEP 70
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 82 RPPHPRLRREAEPEAEP 98
Score = 21.4 bits (43), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 640 RPPGTKIRRIPKPDGNP 590
RPP ++RR +P+ P
Sbjct: 110 RPPHPRLRREAEPEAEP 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,061
Number of Sequences: 438
Number of extensions: 4426
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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