Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_K23
(617 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 37 6e-04
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 29 0.16
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.16
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 24 4.5
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 6.0
Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein. 23 7.9
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 7.9
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 7.9
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 7.9
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 23 7.9
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 7.9
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 36.7 bits (81), Expect = 6e-04
Identities = 15/49 (30%), Positives = 33/49 (67%)
Frame = -3
Query: 561 KLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 415
K+ +EDE+E A+ ++ G+ + ++LEEE + L+ ++++ EKA++
Sbjct: 936 KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHE 984
Score = 25.4 bits (53), Expect = 1.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -3
Query: 576 DEVS--RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVS-EEKANQRVE 406
DEV+ RKL + E E ++ A++ LEE L V L++ + +E AN+ E
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 28.7 bits (61), Expect = 0.16
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = -3
Query: 615 EARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEV 436
E R E+ DG+ K + E++ A+DR+K+ + + ++++ V KS+
Sbjct: 234 ETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV-VTAKDEKSVLA 292
Query: 435 SEEK 424
+E +
Sbjct: 293 TEHQ 296
Score = 25.4 bits (53), Expect = 1.5
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 615 EARLLAEDADGKSDEVSRKLAFVEDELEVAED 520
E+ L +++GK +++S L +ED L+ E+
Sbjct: 174 ESMNLLRESEGKLEKISEYLRTIEDRLKTLEE 205
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 28.7 bits (61), Expect = 0.16
Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = -3
Query: 603 LAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEK 424
L + AD S + L V E + +DR+ S K +++EE K + + +EK
Sbjct: 388 LKQKADATSSKYLIHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEK 447
Query: 423 ANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKXLQKEVDRLEDELGINK-DRYKSLAD 247
++ ++ + LQ E+D + ++LG K D+++
Sbjct: 448 LIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSELDNVREQLGDAKIDKHEDARR 507
Query: 246 EMDSTFAEL 220
+ EL
Sbjct: 508 KKKQEVVEL 516
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.8 bits (49), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 401 NSSTRWLAFSSDTSRDLRELPTTFNSSSSSEILASPD 511
NSST +L +S ++ SSSSS +SPD
Sbjct: 97 NSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.4 bits (48), Expect = 6.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 614 RPVSSPRTLTXNPTRFRENWPSLKTNSKSP 525
RP++ TL NPT FR + S S P
Sbjct: 416 RPLTPGGTLPHNPTYFRTVYSSSDDGSIGP 445
>Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein.
Length = 153
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 333 KTVKXLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 220
K ++ Q E DR E +++ L DE+ ST+ L
Sbjct: 105 KKIQVNQWEADRYVQESDTIRNQLTRLRDELRSTYRSL 142
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 212 PPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 268
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 212 PPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 268
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 211 PPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 267
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 211 PPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 267
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 212 PPPPTTTTTVWIDPTATTTTHVPPTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 268
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 212 PPPPTTTTTVWIDPTATTTTHVPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 268
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 23.0 bits (47), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 333 KTVKXLQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 220
K ++ Q E DR E +++ L DE+ ST+ L
Sbjct: 105 KKIQVNQWEADRYVQESDTIRNQLTRLRDELRSTYRSL 142
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.0 bits (47), Expect = 7.9
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = -1
Query: 236 PPSPSWLVTKLSHSTYRPQTHTNXTCTHTYAAPLPHTPQTXCTI--NYTTTRIHVYT 72
PP P+ T T TH T T P P T T+ + TTT YT
Sbjct: 212 PPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYT 268
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,986
Number of Sequences: 2352
Number of extensions: 5765
Number of successful extensions: 36
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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