Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_K19
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 110 8e-25
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 110 8e-25
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 110 8e-25
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 110 8e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 110 1e-24
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 110 1e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 75 4e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 56 3e-08
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 56 3e-08
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 56 3e-08
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 56 3e-08
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 56 3e-08
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 56 3e-08
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 56 3e-08
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 54 8e-08
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 54 8e-08
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 54 8e-08
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 54 8e-08
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 54 8e-08
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 51 9e-07
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 110 bits (265), Expect = 8e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 110 bits (265), Expect = 8e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 110 bits (265), Expect = 8e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 110 bits (265), Expect = 8e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 110 bits (264), Expect = 1e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QELFKRISEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 375 QELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 562
QE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 373 QEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = -1
Query: 714 QELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
QE + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 385 QEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 392 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 384 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 21 EAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 55.6 bits (128), Expect = 3e-08
Identities = 21/49 (42%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 364 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 35/49 (71%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 EAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 391 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 385 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 386 EAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 50.8 bits (116), Expect = 9e-07
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = -1
Query: 711 ELFKRISEQFTXMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 565
E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 389 EAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,979,715
Number of Sequences: 27780
Number of extensions: 230110
Number of successful extensions: 635
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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