Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_K17
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0133 + 7077855-7078010,7078100-7078834 64 8e-11
01_06_0527 - 30018814-30019638 59 4e-09
01_05_0603 - 23580283-23580627,23580970-23581174,23581286-235814... 58 1e-08
05_06_0258 + 26730904-26731239 32 0.41
04_04_0921 - 29431812-29432786 32 0.41
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522... 31 1.3
12_01_0355 - 2704909-2705745 29 2.9
10_08_0233 - 16061182-16061714,16062765-16063578 29 2.9
08_02_1077 - 24160545-24161936 29 2.9
11_02_0005 - 7264736-7264753,7265086-7265188,7265487-7265539,726... 29 3.9
10_01_0026 - 351737-353443 29 3.9
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 29 3.9
08_01_0216 - 1717696-1718265,1718856-1720082,1720558-1720627,172... 29 5.1
07_01_0942 + 7957776-7958004,7958113-7958708 29 5.1
04_04_0217 - 23693124-23693535,23693965-23694052,23694428-236945... 29 5.1
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 29 5.1
01_01_0681 + 5235623-5235873,5235958-5236285,5236786-5236935,523... 29 5.1
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 28 6.7
06_02_0315 - 14230234-14232771 28 6.7
05_07_0120 + 27827059-27827814 28 6.7
11_03_0006 + 8878611-8878724,8879323-8879706 28 8.9
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 28 8.9
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 28 8.9
>02_02_0133 + 7077855-7078010,7078100-7078834
Length = 296
Score = 64.5 bits (150), Expect = 8e-11
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 14/86 (16%)
Frame = -1
Query: 713 RLYIEPY--MKQTSCP--RCPKNLCKSEALRRWCSEMPA----------RRIVYVGDGRN 576
RL I PY + CP CP N+CK + + R E+ RR+VYVGDGR
Sbjct: 135 RLRILPYHGLPGHGCPLATCPPNMCKGKVMERIIDELSCGCGGALAARRRRVVYVGDGRG 194
Query: 575 DYCPATSLPPHATVFPRRGYPLDDLV 498
DYCP+ L V PR+GYP+ DL+
Sbjct: 195 DYCPSLKLTEMDYVMPRKGYPVWDLI 220
>01_06_0527 - 30018814-30019638
Length = 274
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -1
Query: 668 CPKNLCKSEALRRWCSEMPA--RRIVYVGDGRNDYCPATSLPPHATVFPRRGYPLDDLV 498
CP N+CK + L R + A +R++Y+GDGR DYCP+ L + PRRG+P+ +L+
Sbjct: 151 CPPNMCKGQVLDRIRASAGAAGKRVIYLGDGRGDYCPSLRLGRDDFMMPRRGFPVWELI 209
>01_05_0603 -
23580283-23580627,23580970-23581174,23581286-23581407,
23581493-23581675
Length = 284
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -1
Query: 677 CPRCPKNLCKSEALRRWCSEMPARR-IVYVGDGRNDYCPATSLPPHATVFPRRGYPLDDL 501
C CP+N+CK + + R + +R +Y+GDGR DYCP+ L V P+ YPL +L
Sbjct: 161 CSLCPENMCKGKIIERIQATANGKRHFIYIGDGRGDYCPSLKLGEGDYVMPKEKYPLWNL 220
Query: 500 VKKTLSSPNPQVKAKV 453
+ SS +KA+V
Sbjct: 221 I----SSNKQLLKAEV 232
>05_06_0258 + 26730904-26731239
Length = 111
Score = 32.3 bits (70), Expect = 0.41
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 476 WETRASSSPGRPVDSRGGGTLSRVGAATWRGSNRFSRPLHTRYAW-PASPSTSVSGPRSC 652
W+ R S +P D GGG +RV + G + + A P SP +V G
Sbjct: 21 WDDRHLSGEIKPADGGGGGAAARVERSRSAGHGGYRAAGRVQPALDPPSPRVAVCGFCRF 80
Query: 653 RGS*GTWGRTSASYRARCTDGCA-SRTH 733
G G GR+ A G A +R H
Sbjct: 81 FGGSGKGGRSGGGAAAAVAGGKAKARRH 108
>04_04_0921 - 29431812-29432786
Length = 324
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = +2
Query: 446 GXSLWPSLEGWETRASSSPGRPVDSRGGGTLSRVGAATWRGSNRFSRPL 592
G S W S G +SS P R + S G GT VG WR SRPL
Sbjct: 162 GGSRWWSAAGGRWLSSSWPRRRLFSAGRGT---VGGFRWRAVGEASRPL 207
>04_04_1624 - 34849385-34849410,34849748-34851052,34852121-34852294,
34852386-34852456,34852563-34852618,34853047-34853185,
34853310-34853695,34853801-34853851,34853936-34854021,
34854112-34854553,34856241-34856315,34856457-34856593,
34856679-34856838,34856917-34857012,34857093-34857247,
34857900-34858032
Length = 1163
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 606 PGRHLRAPASQGLALAEVLRAPGAGRLLHIGLDVQTAVPPERT 734
PG R PAS G A A++ R + H+G V T + P RT
Sbjct: 968 PGPGGRPPASTGRAGADLARDYNKNAIRHLGSGVGTPLMPNRT 1010
>12_01_0355 - 2704909-2705745
Length = 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -3
Query: 588 GREKRLLPRHVAAPTRDSVPPPRLSTGRPGEEDALVSQPSSEGQ 457
GREKR P APT + PPP S GR G+ +EG+
Sbjct: 167 GREKRGTP--TLAPTPPTFPPPIRSIGRGGKPCVCFRSFRAEGR 208
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 548 GAATWRGSNRFSRPLHTRYAWPASPSTSVSGPRSCRGS*GTWGRTSASYRARCTDGC 718
GA S+ P H+R PASP + GP S G G+ + S RC C
Sbjct: 124 GAPLCSSSSSALPPPHSRTP-PASPLAAARGPTSHAGETGSRREGARSSSGRCPPSC 179
>08_02_1077 - 24160545-24161936
Length = 463
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 734 RAFWRHSRLYIEPYMKQTSCPRCPKNLCKSEALRRWCSEMPARRIVYV 591
+ F+ H R++ + + C R + L ++E L W PAR +VYV
Sbjct: 230 KRFFGHGRVWAVGPVADSGC-RGEERLPEAEQLFSWLDTCPARSVVYV 276
>11_02_0005 -
7264736-7264753,7265086-7265188,7265487-7265539,
7265791-7265880,7266093-7266217,7266528-7266753
Length = 204
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -3
Query: 567 PRHVAAPTRDSVPPPRLSTGRPGEEDALVSQPSSEGQSDXPGTTATGYSRNSTRTSWWI 391
P+ A P PPP + P D + +SEGQ TT+ G+ R WW+
Sbjct: 39 PKPKAKPPPPPSPPPLPTAPAPTHADLFARRSNSEGQVPKK-TTSMGFER------WWL 90
>10_01_0026 - 351737-353443
Length = 568
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = -3
Query: 552 APTRDSVPPPRLSTGRP-----GEEDALVSQPSSEGQSDXPGTTATGYSRNSTRTS 400
+P S PPP ST P G + +QPSSE S+ T + R S +S
Sbjct: 31 SPPSPSSPPPPASTNAPPKSAGGVSSSTQAQPSSESSSESTTTPSAPAERKSGGSS 86
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 576 VSPVPYIHDTPGRHLRAPASQGLALAEVLRAP 671
V P +D P HLR P SQ LA + +++AP
Sbjct: 882 VDPPTISNDIPN-HLRTPTSQFLATSHIMQAP 912
>08_01_0216 -
1717696-1718265,1718856-1720082,1720558-1720627,
1721579-1721602,1722073-1722140
Length = 652
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 482 TRASSSP---GRPVDSRGGGTLSRVGAATWRGSNRFSRPLHTRYAW 610
TR+ + P G PV GG S G+ W G + +RP H+ W
Sbjct: 181 TRSCTDPDLFGWPVVQYGGPMQSPGGSVLWNGISTGARPRHSSPDW 226
>07_01_0942 + 7957776-7958004,7958113-7958708
Length = 274
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 428 PVAVVPGXSLWPSLEGWETRASSSPGRPVDSRGGGTLSRVGAATWRGSNRFSRPLHTRYA 607
P+ + G + WP + GW RA + G G R G S+ R R
Sbjct: 86 PILCMSGLACWPIVPGWPDRAQCAGGEAQAQPSG----RAGPK----SHVVGRAFGPRAL 137
Query: 608 WPASPSTSVS 637
WP+ ST+ +
Sbjct: 138 WPSIVSTTTT 147
>04_04_0217 -
23693124-23693535,23693965-23694052,23694428-23694503,
23694729-23694787,23694853-23694934,23695533-23696577,
23696700-23696998
Length = 686
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 467 LEGWETRASSSPGRPVDSRGGGTLSRVG 550
L WE R S PGR + GGG+ +R G
Sbjct: 246 LGSWERRRRSLPGRGDGASGGGSAARNG 273
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 647 SEALRRWCSEMPARRIVYVGDGRNDYCPATSLPPHATVFPRRG 519
+ AL+ ++ P R+ V V D ++ PAT +PP+ +FP G
Sbjct: 134 ARALQESLNDEPPRQNVPVKDVHSESTPATFMPPY--IFPSTG 174
>01_01_0681 +
5235623-5235873,5235958-5236285,5236786-5236935,
5237255-5237503,5238581-5238670,5238781-5238966,
5239477-5239598,5242915-5243011
Length = 490
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 626 CSEMPARRIVYVGDGRNDYCPATSLPPHATVFPRRGYPLDDLVKKTLSSPNPQ 468
CSE+ RR G G+ D A LPP + +P G L+ + SP P+
Sbjct: 25 CSELLRRRRRGAGSGKGDAAAAARLPPGSFGWPVVGETLEFV--SCAYSPRPE 75
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +2
Query: 479 ETRASSSPGRPVDSRGG--GTLSRVGAATWRGS 571
+ RASSS RPVD+R G G LS G A+ R S
Sbjct: 369 KARASSSVLRPVDARRGHEGDLSSSGNASVRSS 401
>06_02_0315 - 14230234-14232771
Length = 845
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 660 EPLQERGPETLVLGDAGQA---YRVCRGREKRLLPRHVAAPTRDSVPPPRLSTGRPGEE 493
+PL+ ET GD G+ Y CR E+++ P +DSV LS G +
Sbjct: 415 DPLETEAVETSECGDLGEEASEYGDCREDEEKIEPEEAPIVRKDSVLEVALSGEATGRD 473
>05_07_0120 + 27827059-27827814
Length = 251
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 582 EKRLLPRHVAAPTRDSVPPPRLSTGRPGEEDALVSQPSSEGQSDXPGTTATGYSR 418
+K LLP + P PPP S +P + D S + G +D P A +R
Sbjct: 182 DKVLLPYALFGPKPPPSPPPAPSK-KPAKGDTSASAEAPAGSADHPAGAAPAAAR 235
>11_03_0006 + 8878611-8878724,8879323-8879706
Length = 165
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 524 GGGTLSRVGAATWRGSNRFSRPLHTRYAWPASPSTSVSGP 643
GGGT + RG R PLH RYA P P + + P
Sbjct: 85 GGGTEELAVLVSGRGGVRARTPLH-RYAAPRVPEPAGAAP 123
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = -3
Query: 639 PETLVLGDAGQAYRVCRGREKRLLPRHVAAP------TRDSVP--PPRLSTGRPGEEDAL 484
P L LG +GQ ++ G + L P +P S+P P + G DAL
Sbjct: 690 PCDLQLGFSGQKQQILPGYGE-LRPAASGSPQLGGMAANSSIPTRPSQPQFGSMARTDAL 748
Query: 483 VSQPSSEGQSDXPGTTATGYSRNSTR 406
+ PS G P TG+S+ ++R
Sbjct: 749 PTGPSQPGSLARPNFVPTGFSQFASR 774
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -3
Query: 630 LVLGDAGQAYRVCRGREKRLLPRHVAAPTRDSVPPPRLSTGRP--GEEDALVSQPSSEGQ 457
LVL A + R +R+ R AAPT+ P LS GEED + +
Sbjct: 33 LVLLAAAAPHHHHHHRRRRVYRRQRAAPTQTRAPRRTLSASNAARGEEDLEEAIYEFMRR 92
Query: 456 SDXPGTTAT 430
SD PG T
Sbjct: 93 SDKPGAFPT 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,995,355
Number of Sequences: 37544
Number of extensions: 455515
Number of successful extensions: 1715
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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