Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_K07
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    26   1.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   4.4  

>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 571 TAXDNPGKL-TSHDIVNYLLEHYPTDTLLF 485
           T  DN   L  SH I+NYL++ Y  D  L+
Sbjct: 57  TVNDNGVPLYDSHAIINYLVQKYAKDDTLY 86


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 112  TRAPSGRPGSARAPTARGPSAPADILLQV 198
            + AP G  G+A APT       A  +LQV
Sbjct: 1507 SEAPPGTDGAAAAPTGGAAVTNATSILQV 1535


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 246 ANIKIGDFNASTPKFIAVSAAKSYDRKCRANTALVSVKTGGG 371
           AN  +G F +  P     SAA +      A  A VS  +GGG
Sbjct: 614 ANYALGTFKSDFPPIPNSSAAAAAAAVAAAVAASVSPGSGGG 655


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,940
Number of Sequences: 2352
Number of extensions: 11816
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)