Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_K06
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39678-8|AAK39208.2|  228|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z82055-10|CAB04848.2|  659|Caenorhabditis elegans Hypothetical p...    29   4.5  

>U39678-8|AAK39208.2|  228|Caenorhabditis elegans Hypothetical
           protein C39D10.6 protein.
          Length = 228

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -2

Query: 226 IHIYVYIFPYIIERCFDKILLFIYLISLNLYAXRYIMLEKF*LNCH-LSIQEGLKTD 59
           +++Y Y+F  +I      I+LFI+LIS+ + A   I L +   N    S+QE L  D
Sbjct: 100 LYLYPYLFFQVISIAISIIVLFIFLISIAVGASMVIDLARNVGNVDTASVQEKLDAD 156


>AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical
           protein Y105C5B.8 protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 519 LRIIGRNQITFL*LTLIRKTFITFVKLFFFLQRNQYFVMGISVSENYFSM-RPLPVRKKY 695
           +RI       F  L  I     TF+  F F + N+ FV G++    +FS+  PLP    Y
Sbjct: 104 VRIFQSFSSIFFQLFYIAVVLNTFMAKFQFWRSNENFVRGVAYFCAFFSIFEPLP--SVY 161

Query: 696 DEIKKNIX*LHCS 734
            +I+++   L+CS
Sbjct: 162 KDIQRDGHQLNCS 174


>AC024801-9|AAF59653.3|  791|Caenorhabditis elegans Hypothetical
           protein Y50D7A.1 protein.
          Length = 791

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +2

Query: 497 YNLRTTYT*NNRPKSDYIFVTNT-NTKNFYNVRKIV-FFFTTKSIFCNGYFCI*KLF 661
           YN    +T N++ ++  I   N   T N     KI  FFF   S FC+ Y C+ K+F
Sbjct: 575 YNQNVLFTENSQKRNHKIRKKNALKTSNIQIFSKIASFFFEFFSDFCDSYSCL-KIF 630


>Z82055-10|CAB04848.2|  659|Caenorhabditis elegans Hypothetical
           protein T26H2.7 protein.
          Length = 659

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 232 INIHIYVYI-FPYIIERCFDKILLFIYLISLNLYAXRYI 119
           + +  Y+ I F Y+I R F+K L F+Y ++L   A  ++
Sbjct: 145 VEVQFYLLIPFLYLIGRNFNKNLQFLYYLTLGFLAFSFV 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,867,198
Number of Sequences: 27780
Number of extensions: 306088
Number of successful extensions: 630
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)