Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_K05
         (791 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095085-1|AAM11413.1|   97|Drosophila melanogaster RE55001p pro...    52   7e-07
AE013599-2629|AAF57742.1|   97|Drosophila melanogaster CG17680-P...    52   7e-07
AY071557-1|AAL49179.1|  238|Drosophila melanogaster RE62711p pro...    29   7.3  
AE014296-3564|AAN12176.1|  238|Drosophila melanogaster CG32442-P...    29   7.3  

>AY095085-1|AAM11413.1|   97|Drosophila melanogaster RE55001p
           protein.
          Length = 97

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = -1

Query: 791 GXLCVVFAVVPGLLIGAAISXNIANFLEXNELFVPS 684
           G L +  AV+PGL +GA IS N+ANFLE N+LFVP+
Sbjct: 55  GLLAIFCAVIPGLFVGATISKNVANFLEENDLFVPA 90


>AE013599-2629|AAF57742.1|   97|Drosophila melanogaster CG17680-PA
           protein.
          Length = 97

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = -1

Query: 791 GXLCVVFAVVPGLLIGAAISXNIANFLEXNELFVPS 684
           G L +  AV+PGL +GA IS N+ANFLE N+LFVP+
Sbjct: 55  GLLAIFCAVIPGLFVGATISKNVANFLEENDLFVPA 90


>AY071557-1|AAL49179.1|  238|Drosophila melanogaster RE62711p
           protein.
          Length = 238

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 742 LLLVKT*QISLKXMNSLYHRTMTMMTTNFIT-GILSSFFFLPVPYQKNNT 596
           LLL+ T  +S+  M  +  R  +++    +    LS FF LP+   +NNT
Sbjct: 126 LLLIITATLSIDWMQKIGFRNFSLIILKVVLISNLSKFFLLPILVWRNNT 175


>AE014296-3564|AAN12176.1|  238|Drosophila melanogaster CG32442-PA,
           isoform A protein.
          Length = 238

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 742 LLLVKT*QISLKXMNSLYHRTMTMMTTNFIT-GILSSFFFLPVPYQKNNT 596
           LLL+ T  +S+  M  +  R  +++    +    LS FF LP+   +NNT
Sbjct: 126 LLLIITATLSIDWMQKIGFRNFSLIILKVVLISNLSKFFLLPILVWRNNT 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,461,878
Number of Sequences: 53049
Number of extensions: 465409
Number of successful extensions: 694
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)