Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_K05
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78542-8|CAB54233.1|   90|Caenorhabditis elegans Hypothetical pr...    33   0.23 
U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical p...    28   8.8  
AL032630-12|CAA21567.1|  260|Caenorhabditis elegans Hypothetical...    28   8.8  

>Z78542-8|CAB54233.1|   90|Caenorhabditis elegans Hypothetical
           protein F20D1.10 protein.
          Length = 90

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 791 GXLCVVFAVVPGLLIGAAISXNIANFLEXNELFVPS 684
           G L ++F     L IG  I+   A++LE NE+FVP+
Sbjct: 49  GVLKLIFVSASSLYIGGLIAHKGASYLEENEIFVPT 84


>U50311-15|AAA92317.1|  281|Caenorhabditis elegans Hypothetical
           protein C25E10.12 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 555 LGLNKIYQMLSFCTY 511
           LG+NK Y++LS CTY
Sbjct: 129 LGINKAYELLSNCTY 143


>AL032630-12|CAA21567.1|  260|Caenorhabditis elegans Hypothetical
           protein Y62H9A.12 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 351 ITFVFAQINFKHYLN*NKKKMITRTFNLQNKELYILTVSQI 473
           +TF F + +  +Y   NK+  +T  F+ QN  L++L  ++I
Sbjct: 70  VTFKFGKCDIAYYRQENKQNELTLVFD-QNGTLFLLNATRI 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,364,103
Number of Sequences: 27780
Number of extensions: 290799
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)