Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_J23
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 41 0.005
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 41 0.005
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 41 0.005
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 41 0.005
CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein. 33 0.95
BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating prote... 33 1.3
AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein iso... 33 1.3
AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding pro... 33 1.3
AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding pro... 33 1.3
AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein. 33 1.3
U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein p... 31 3.8
BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating p... 31 3.8
BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating prote... 31 3.8
BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating prote... 31 3.8
AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating p... 31 3.8
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 40.7 bits (91), Expect = 0.005
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLGDSFYVQHDIFRLGIHD 557
V+G+ K DEDP + Q F+LK + D++ +D+FRL +H+
Sbjct: 85 VVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 40.7 bits (91), Expect = 0.005
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLGDSFYVQHDIFRLGIHD 557
V+G+ K DEDP + Q F+LK + D++ +D+FRL +H+
Sbjct: 85 VVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 40.7 bits (91), Expect = 0.005
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLGDSFYVQHDIFRLGIHD 557
V+G+ K DEDP + Q F+LK + D++ +D+FRL +H+
Sbjct: 85 VVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 40.7 bits (91), Expect = 0.005
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLGDSFYVQHDIFRLGIHD 557
V+G+ K DEDP + Q F+LK + D++ +D+FRL +H+
Sbjct: 85 VVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHN 125
>CR536535-1|CAG38772.1| 466|Homo sapiens G3BP protein.
Length = 466
Score = 33.1 bits (72), Expect = 0.95
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G D +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNDNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BC011731-1|AAH11731.1| 449|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 2 protein.
Length = 449
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G P +MQTFVL P G + FYV +D+FR
Sbjct: 94 VMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFR 132
>AF145284-1|AAD51932.1| 482|Homo sapiens RNA-binding protein
isoform G3BP-2a protein.
Length = 482
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G P +MQTFVL P G + FYV +D+FR
Sbjct: 94 VMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFR 132
>AF053535-1|AAC95292.1| 449|Homo sapiens ras-GAP/RNA binding
protein G3BP2 protein.
Length = 449
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G P +MQTFVL P G + FYV +D+FR
Sbjct: 94 VMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFR 132
>AF051311-1|AAC15705.1| 449|Homo sapiens Ras-GAP SH3 binding
protein protein.
Length = 449
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G P +MQTFVL P G + FYV +D+FR
Sbjct: 94 VMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFR 132
>AB014560-1|BAA31635.2| 490|Homo sapiens KIAA0660 protein protein.
Length = 490
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G P +MQTFVL P G + FYV +D+FR
Sbjct: 102 VMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFR 140
>U32519-1|AAB07787.1| 466|Homo sapiens GAP SH3 binding protein
protein.
Length = 466
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G + +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BT019384-1|AAV38191.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein protein.
Length = 466
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G + +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BC108278-1|AAI08279.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G + +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>BC006997-1|AAH06997.1| 466|Homo sapiens GTPase activating protein
(SH3 domain) binding protein 1 protein.
Length = 466
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G + +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
>AK222606-1|BAD96326.1| 466|Homo sapiens Ras-GTPase-activating
protein SH3-domain-binding protein variant protein.
Length = 466
Score = 31.1 bits (67), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 679 VLGRXKCDEDPPHLYMQTFVLKPLG---DSFYVQHDIFR 572
V+G + +MQTFVL P G + FYV +DIFR
Sbjct: 94 VMGLLSNNNQALRRFMQTFVLAPEGSVANKFYVHNDIFR 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,752,006
Number of Sequences: 237096
Number of extensions: 1760144
Number of successful extensions: 6367
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6361
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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