Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_J22
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).  pr...    31   4.3  

>AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).
           protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 527 SHHMSIPSQTCTPQLLCHRCHFQTSSNV--FIPYSIHSRYSTHPSQHSHLCCMQ-SPFIR 697
           S + +  + TC+      + H +  S+     P++IHSR  THP  H+H+C    SP   
Sbjct: 296 SRYSAPHAHTCSHTSHITQLHTRPCSHTCAHTPHTIHSR--THPLTHAHVCSHTCSPIHT 353

Query: 698 HFRXPTS 718
           H    TS
Sbjct: 354 HTSSHTS 360


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,554,043
Number of Sequences: 237096
Number of extensions: 2087649
Number of successful extensions: 7962
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7956
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)