Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_J19
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       61   9e-12
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.73 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.73 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.73 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.1  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 61.3 bits (142), Expect = 9e-12
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = -2

Query: 717 DFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNREN 538
           ++  +++HGD  QR+RE  +  F++G   +L+ T + ARG+D++ VS VINYDLP   + 
Sbjct: 475 NYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPKGIDE 534

Query: 537 Y 535
           Y
Sbjct: 535 Y 535


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 423 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 328
           +I+ MP +VA L+ G +IF I++      CD+
Sbjct: 86  AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 423 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 328
           +I+ MP +VA L+ G +IF I++      CD+
Sbjct: 86  AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 423 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 328
           +I+ MP +VA L+ G +IF I++      CD+
Sbjct: 86  AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 315 HTPYKYRNRTQDTEYKSEKCRRLR 386
           H PY+ + + Q  + + ++ RRLR
Sbjct: 160 HRPYQQQQQQQQRQQQRQEERRLR 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,441
Number of Sequences: 438
Number of extensions: 4588
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)