Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_J12
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472...    72   5e-13

>11_04_0330 -
           16446685-16446776,16446968-16447119,16447172-16447281,
           16447518-16447619,16447705-16447854,16448195-16448350,
           16448552-16448713,16449549-16449638,16450152-16450271,
           16451323-16451418,16451502-16451638,16453400-16453622
          Length = 529

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = -1

Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPE 312
           P  +AVLVR HG+YVWGD+W  AKT  ECY YLF+ A+++ +LG+D T  PE
Sbjct: 197 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLYQLGIDWT-TPE 247



 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = -3

Query: 690 AGAVIHTHSPHAVRCTLLYD--KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTP 517
           AGAVIH+H       T+L    K F +TH EMIKGIK         Y ++LVVPIIENTP
Sbjct: 127 AGAVIHSHGMETCIATMLDPGAKEFRMTHMEMIKGIKGHG------YRDELVVPIIENTP 180

Query: 516 FEKDLAGSLEEALKEXP 466
           +E +L  SL EA+   P
Sbjct: 181 YEYELTDSLAEAIAAYP 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,016,585
Number of Sequences: 37544
Number of extensions: 295619
Number of successful extensions: 579
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)