Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_J12
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017594-1|AAH17594.1| 242|Homo sapiens APAF1 interacting prote... 96 1e-19
BC010133-1|AAH10133.1| 204|Homo sapiens Unknown (protein for MG... 96 1e-19
BC009077-1|AAH09077.1| 242|Homo sapiens APAF1 interacting prote... 96 1e-19
BC008440-1|AAH08440.1| 242|Homo sapiens APAF1 interacting prote... 95 2e-19
AF132963-1|AAD27738.1| 242|Homo sapiens CGI-29 protein protein. 93 9e-19
BC142636-1|AAI42637.1| 373|Homo sapiens PGLYRP4 protein protein. 30 6.8
BC107158-1|AAI07159.1| 373|Homo sapiens peptidoglycan recogniti... 30 6.8
AL591704-3|CAI19492.1| 373|Homo sapiens peptidoglycan recogniti... 30 6.8
>BC017594-1|AAH17594.1| 242|Homo sapiens APAF1 interacting protein
protein.
Length = 242
Score = 95.9 bits (228), Expect = 1e-19
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -3
Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
AGAVIHTHS AV TLL+ + F+ITHQEMIKGIK + G Y RYD+ LVVPIIENTP
Sbjct: 110 AGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPE 169
Query: 513 EKDLAGSLEEALKEXPWD*CGACQKTRSV 427
EKDL + A+ E P D C + V
Sbjct: 170 EKDLKDRMAHAMNEYP-DSCAVLVRRHGV 197
Score = 91.1 bits (216), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETAQNG 297
P + AVLVRRHGVYVWG+TW++AKTM ECYDYLF++AV MKK+GLDP+ P +NG
Sbjct: 185 PDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLP-VGENG 240
>BC010133-1|AAH10133.1| 204|Homo sapiens Unknown (protein for
MGC:19822) protein.
Length = 204
Score = 95.9 bits (228), Expect = 1e-19
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -3
Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
AGAVIHTHS AV TLL+ + F+ITHQEMIKGIK + G Y RYD+ LVVPIIENTP
Sbjct: 72 AGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPE 131
Query: 513 EKDLAGSLEEALKEXPWD*CGACQKTRSV 427
EKDL + A+ E P D C + V
Sbjct: 132 EKDLKDRMAHAMNEYP-DSCAVLVRRHGV 159
Score = 91.1 bits (216), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETAQNG 297
P + AVLVRRHGVYVWG+TW++AKTM ECYDYLF++AV MKK+GLDP+ P +NG
Sbjct: 147 PDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLP-VGENG 202
>BC009077-1|AAH09077.1| 242|Homo sapiens APAF1 interacting protein
protein.
Length = 242
Score = 95.9 bits (228), Expect = 1e-19
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -3
Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
AGAVIHTHS AV TLL+ + F+ITHQEMIKGIK + G Y RYD+ LVVPIIENTP
Sbjct: 110 AGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPE 169
Query: 513 EKDLAGSLEEALKEXPWD*CGACQKTRSV 427
EKDL + A+ E P D C + V
Sbjct: 170 EKDLKDRMAHAMNEYP-DSCAVLVRRHGV 197
Score = 91.1 bits (216), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETAQNG 297
P + AVLVRRHGVYVWG+TW++AKTM ECYDYLF++AV MKK+GLDP+ P +NG
Sbjct: 185 PDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLP-VGENG 240
>BC008440-1|AAH08440.1| 242|Homo sapiens APAF1 interacting protein
protein.
Length = 242
Score = 95.5 bits (227), Expect = 2e-19
Identities = 51/89 (57%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -3
Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
AGAVIHTHS AV TLL+ + F+ITHQEMIKGIK + G Y RYD+ LVVPIIENTP
Sbjct: 110 AGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPE 169
Query: 513 EKDLAGSLEEALKEXPWD*CGACQKTRSV 427
EKDL + A+ E P D C + V
Sbjct: 170 EKDLKDRMAHAVNEYP-DSCAVLVRRHGV 197
Score = 91.1 bits (216), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETAQNG 297
P + AVLVRRHGVYVWG+TW++AKTM ECYDYLF++AV MKK+GLDP+ P +NG
Sbjct: 185 PDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLP-VGENG 240
>AF132963-1|AAD27738.1| 242|Homo sapiens CGI-29 protein protein.
Length = 242
Score = 93.1 bits (221), Expect = 9e-19
Identities = 50/89 (56%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = -3
Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
AGAVIHTHS AV TLL+ + F+ITHQEMIKGIK + G Y RYD+ LVVPIIENTP
Sbjct: 110 AGAVIHTHSKAAVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPE 169
Query: 513 EKDLAGSLEEALKEXPWD*CGACQKTRSV 427
EK L + A+ E P D C + V
Sbjct: 170 EKTLKDRMAHAMNEYP-DSCAVLVRRHGV 197
Score = 91.1 bits (216), Expect = 3e-18
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDPTFNPETAQNG 297
P + AVLVRRHGVYVWG+TW++AKTM ECYDYLF++AV MKK+GLDP+ P +NG
Sbjct: 185 PDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLP-VGENG 240
>BC142636-1|AAI42637.1| 373|Homo sapiens PGLYRP4 protein protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 434 GVYVWGDT-WQ--QAKTMTECYDYLFEMAVEMKKLGLDPT 324
G+ WGD+ W QAK ++E YLFE ++ + GL PT
Sbjct: 12 GIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGL-PT 50
>BC107158-1|AAI07159.1| 373|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 434 GVYVWGDT-WQ--QAKTMTECYDYLFEMAVEMKKLGLDPT 324
G+ WGD+ W QAK ++E YLFE ++ + GL PT
Sbjct: 12 GIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGL-PT 50
>AL591704-3|CAI19492.1| 373|Homo sapiens peptidoglycan recognition
protein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 434 GVYVWGDT-WQ--QAKTMTECYDYLFEMAVEMKKLGLDPT 324
G+ WGD+ W QAK ++E YLFE ++ + GL PT
Sbjct: 12 GIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGL-PT 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,220,652
Number of Sequences: 237096
Number of extensions: 1618649
Number of successful extensions: 2624
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2619
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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