Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_J12
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071553-1|AAL49175.1|  227|Drosophila melanogaster RE61993p pro...   103   3e-22
AE014298-1952|AAF48310.1|  227|Drosophila melanogaster CG11134-P...   103   3e-22

>AY071553-1|AAL49175.1|  227|Drosophila melanogaster RE61993p
           protein.
          Length = 227

 Score =  103 bits (246), Expect = 3e-22
 Identities = 51/76 (67%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -3

Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
           AGAVIHTHS HAV  TLL+  K F  TH EMIKG+ D +  RYLRYDE+LVVPIIENTPF
Sbjct: 100 AGAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEELVVPIIENTPF 159

Query: 513 EKDLAGSLEEALKEXP 466
           E+DLA S+  A+ E P
Sbjct: 160 ERDLADSMYAAMMEYP 175



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -1

Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDP 327
           PG SA+LVRRHGVYVWG  W++AKTM+ECYDYLF +AVEMKK G+DP
Sbjct: 175 PGCSAILVRRHGVYVWGQNWEKAKTMSECYDYLFSIAVEMKKAGIDP 221


>AE014298-1952|AAF48310.1|  227|Drosophila melanogaster CG11134-PA
           protein.
          Length = 227

 Score =  103 bits (246), Expect = 3e-22
 Identities = 51/76 (67%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -3

Query: 690 AGAVIHTHSPHAVRCTLLYD-KVFEITHQEMIKGIKDTSLGRYLRYDEKLVVPIIENTPF 514
           AGAVIHTHS HAV  TLL+  K F  TH EMIKG+ D +  RYLRYDE+LVVPIIENTPF
Sbjct: 100 AGAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEELVVPIIENTPF 159

Query: 513 EKDLAGSLEEALKEXP 466
           E+DLA S+  A+ E P
Sbjct: 160 ERDLADSMYAAMMEYP 175



 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 36/47 (76%), Positives = 42/47 (89%)
 Frame = -1

Query: 467 PGTSAVLVRRHGVYVWGDTWQQAKTMTECYDYLFEMAVEMKKLGLDP 327
           PG SA+LVRRHGVYVWG  W++AKTM+ECYDYLF +AVEMKK G+DP
Sbjct: 175 PGCSAILVRRHGVYVWGQNWEKAKTMSECYDYLFSIAVEMKKAGIDP 221


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,759,503
Number of Sequences: 53049
Number of extensions: 528661
Number of successful extensions: 1123
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)