Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_J11
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 239 2e-63
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 188 4e-48
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 152 3e-37
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 102 3e-22
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.31
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.31
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 1.7
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 1.7
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.7
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 1.7
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 2.2
Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical pr... 29 5.1
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 5.1
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 6.7
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 239 bits (584), Expect = 2e-63
Identities = 112/210 (53%), Positives = 150/210 (71%)
Frame = -3
Query: 793 SYKRSAAAYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGT 614
SYK+SA A+E E+VPV V K+G ++ +DEE+ +VNF+KFT L TVFQK+ GT
Sbjct: 200 SYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GT 257
Query: 613 VTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLL 434
+TA NASTLNDG ++KP+ARI+ + D P+DF +AP + PK+L
Sbjct: 258 ITAANASTLNDGAAAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKIL 317
Query: 433 EKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVH 254
E+ GV++ DVA WE+NEAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGAR++ H
Sbjct: 318 ERAGVKQSDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITH 377
Query: 253 LCHALKKGEKGVASICNGGGGASSVMIEKM 164
L H LK G+ GVA+ICNGGGG+S ++I+K+
Sbjct: 378 LVHTLKSGQIGVAAICNGGGGSSGMVIQKL 407
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 188 bits (458), Expect = 4e-48
Identities = 95/211 (45%), Positives = 140/211 (66%), Gaps = 1/211 (0%)
Frame = -3
Query: 793 SYKRSAAAYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKEN-G 617
SYK+++ A+ + F +E+VPV V R + V+ EDEEYK++ K + L VF ++ G
Sbjct: 182 SYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTG 240
Query: 616 TVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKL 437
T+T NAS+LNDG + P+A +V FA+ PIDF +AP A+ L
Sbjct: 241 TITPANASSLNDGAVATVVVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLL 299
Query: 436 LEKTGVRKEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVV 257
L+K+G++ D+ALWE+NEAF+V +A K L ++PS +NV GGAV++GHP+GMSG RIV
Sbjct: 300 LKKSGLQVSDIALWELNEAFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVN 359
Query: 256 HLCHALKKGEKGVASICNGGGGASSVMIEKM 164
L ++L G+ GVA+ICNGGG A++V+I+K+
Sbjct: 360 SLAYSLAPGQLGVAAICNGGGEATAVLIKKL 390
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 163 bits (395), Expect = 2e-40
Identities = 78/194 (40%), Positives = 118/194 (60%)
Frame = -3
Query: 745 ELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXX 566
E+V V V K+G + +D+ K ++ + S++ GT++ + + DG
Sbjct: 268 EVVAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTISDKHIAAFTDGAAAV 326
Query: 565 XXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEIN 386
N+KP+ARI+ + D +DF +AP + P LL+ GV + DVA WE+N
Sbjct: 327 ILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVN 386
Query: 385 EAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASIC 206
EAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C
Sbjct: 387 EAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALC 446
Query: 205 NGGGGASSVMIEKM 164
+G GG+S ++I+K+
Sbjct: 447 DGDGGSSGMVIQKL 460
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 152 bits (368), Expect = 3e-37
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = -3
Query: 772 AYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNAS 593
A EA + +E+V + + ++G F DE + E KL VFQK+ G V AGNAS
Sbjct: 192 AQEAGVYKNEIVGITIKGRKGEES-FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNAS 249
Query: 592 TLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRK 413
++DG K N+KP+AR+V ++ CDP I PA AI ++L+K+G++
Sbjct: 250 GISDGAAALVVAGEDSVKSKNLKPLARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKI 309
Query: 412 EDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL-- 239
D+ ++E+NEAF+ A+A Q+ LG+ K+NV+GGA++LGHP+ SGARI H+ H L
Sbjct: 310 GDIDIFEVNEAFAPQALAVQRELGIPMEKLNVNGGAIALGHPLAASGARISTHIVHELHR 369
Query: 238 KKGEKGVASICNGGGGASSVMIEKM 164
+ + G+ S C GGG +++ EK+
Sbjct: 370 RNVKYGIGSACIGGGQGIAILFEKV 394
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 102 bits (245), Expect = 3e-22
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Frame = -3
Query: 793 SYKRSAAAYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGT 614
S+ ++ A + F D +VPV + K+ P ED + EK + L F K +GT
Sbjct: 220 SHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKEDNGIRVSTLEKLSSLKPAFVKPHGT 276
Query: 613 VTAGNASTLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPID-FPIAPAVAIPKL 437
VTA NAS L DG A KP A + + DP D ++PA IPKL
Sbjct: 277 VTAANASYLTDGASAALIMTEEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKL 336
Query: 436 LEKTGVRKEDVALWEINEAFSVVAVANQKLLGLD-----------------PSKINVHGG 308
L+K G+ +DV ++EI+EAF+ +AN + D K+N+ GG
Sbjct: 337 LDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGG 396
Query: 307 AVSLGHPIGMSGARIVVHLCHALK--KGEKGVASICNGGGGASSVMIE 170
++S+GHP G +G R+ H H LK KG+ V + C GG ++IE
Sbjct: 397 SLSIGHPFGATGVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 325 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 203
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.31
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 325 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 203
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 156 STYIFSIITDDAPPPPLQIEATPFSPFFK 242
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 156 STYIFSIITDDAPPPPLQIEATPFSPFFK 242
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 156 STYIFSIITDDAPPPPLQIEATPFSPFFK 242
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 156 STYIFSIITDDAPPPPLQIEATPFSPFFK 242
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 156 STYIFSIITDDAPPPPLQIEATPFSPFFK 242
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 349 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 170
+LGL + +V V+L + + G VH+ A + KG + G GG+ S +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407
Query: 169 K 167
K
Sbjct: 408 K 408
>Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical
protein R10D12.1 protein.
Length = 485
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 36 ILIXSQFLKTSFLFSLHXQKNLCNSVLSXHSNDYTLHFMLSTYIFSI 176
I + F +TS +FS+ LC SV S Y LH ++S +F+I
Sbjct: 179 IAALTTFGQTSSIFSMPVAGELCTSVFGWKSVFY-LHAIISLVVFTI 224
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -3
Query: 787 KRSAAAYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTV 635
+R AA A A P P P K PV+F+++ + + TK ST+
Sbjct: 27 EREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQSTI 76
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 320 CTWWSCQFGSSNWYVWSSHC 261
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 763 AXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 608
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 320 CTWWSCQFGSSNWYVWSSHC 261
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 320 CTWWSCQFGSSNWYVWSSHCCTSV 249
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 SFLFSLHXQKNLCNSVLSXHSNDYTLHFMLSTYIFSIITDDAPPPP 203
SF ++ + N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 66 SFLFSLHXQKNLCNSVLSXHSNDYTLHFMLSTYIFSIITDDAPPPP 203
SF ++ + N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,995,815
Number of Sequences: 27780
Number of extensions: 357220
Number of successful extensions: 1113
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -