Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_J10
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 330 7e-91
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 330 7e-91
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 330 7e-91
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 330 7e-91
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 330 7e-91
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 330 7e-91
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 256 1e-68
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 256 1e-68
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 5.0
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 216 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 275
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 276 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 332
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 333 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 216 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 275
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 276 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 332
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 333 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 58 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 117
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 118 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 177
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 178 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 234
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 235 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 216 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 275
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 276 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 332
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 333 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 58 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 117
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 118 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 177
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 178 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 234
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 235 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 289
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 330 bits (811), Expect = 7e-91
Identities = 158/235 (67%), Positives = 182/235 (77%)
Frame = -1
Query: 783 YCSVVRVIAHXXXXXXXXXXXKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDE 604
YCS +RVIAH KAH++EIQ+NGGTIE KV WAREHLEK + VD+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 603 MIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYH 424
MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+H
Sbjct: 216 MIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFH 275
Query: 423 HRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKG 244
HRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D++M++G
Sbjct: 276 HRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRG 332
Query: 243 CCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALHG 79
+GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A G
Sbjct: 333 AVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMG 387
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 256 bits (627), Expect = 1e-68
Identities = 122/181 (67%), Positives = 141/181 (77%)
Frame = -1
Query: 621 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 442
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 441 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 262
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 261 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALH 82
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 81 G 79
G
Sbjct: 339 G 339
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 256 bits (627), Expect = 1e-68
Identities = 122/181 (67%), Positives = 141/181 (77%)
Frame = -1
Query: 621 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 442
V A +MID I TSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 441 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 262
GQKG+HHRT +N KIYRIG+ ++GK NN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 261 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAALH 82
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K A
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 81 G 79
G
Sbjct: 339 G 339
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 549 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 388
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,253,900
Number of Sequences: 27780
Number of extensions: 398963
Number of successful extensions: 1040
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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