Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_J07
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 212 3e-55
06_01_0427 - 3054204-3054614 212 3e-55
06_01_0425 - 3045557-3046004,3046852-3046856 212 3e-55
06_01_0423 - 3039527-3039937 212 3e-55
05_04_0449 - 21355439-21355849 212 3e-55
04_03_0909 + 20748653-20749063 212 3e-55
01_06_1456 + 37507156-37507566 212 3e-55
06_01_0217 - 1644696-1645034,1645143-1645214 210 6e-55
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 210 6e-55
11_01_0348 - 2607315-2607424,2608634-2609030 206 1e-53
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 192 2e-49
12_02_0048 - 12852335-12852745 184 6e-47
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 180 8e-46
12_02_0047 - 12836779-12837189 170 1e-42
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 130 8e-31
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 107 1e-23
09_04_0353 + 16915618-16916934 29 2.8
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 3.7
01_06_0746 - 31636024-31641396 24 6.7
03_06_0244 + 32613914-32614666 28 8.6
>06_01_0428 + 3055163-3055573
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 43 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 102
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0423 - 3039527-3039937
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 212 bits (517), Expect = 3e-55
Identities = 101/108 (93%), Positives = 107/108 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 210 bits (514), Expect = 6e-55
Identities = 102/108 (94%), Positives = 106/108 (98%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
Sbjct: 29 SAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSH 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 89 AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 210 bits (514), Expect = 6e-55
Identities = 102/108 (94%), Positives = 106/108 (98%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
Sbjct: 43 SAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSH 102
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 AVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 206 bits (503), Expect = 1e-53
Identities = 98/105 (93%), Positives = 104/105 (99%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 29 SAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 405
A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 89 AVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 192 bits (468), Expect = 2e-49
Identities = 93/107 (86%), Positives = 100/107 (93%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS
Sbjct: 8 SAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQSH 67
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 399
A+ ALQEA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 68 AVLALQEAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>12_02_0048 - 12852335-12852745
Length = 136
Score = 184 bits (448), Expect = 6e-47
Identities = 87/108 (80%), Positives = 100/108 (92%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP+ G+KKPHR++PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQS+
Sbjct: 29 SAPTMAGLKKPHRFKPGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ ALQEA+E YLVGLF+DTNLC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 89 AVVALQEAAETYLVGLFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 180 bits (439), Expect = 8e-46
Identities = 87/101 (86%), Positives = 95/101 (94%)
Frame = -1
Query: 701 GVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQ 522
GVKKP R+RPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQ
Sbjct: 110 GVKKPRRHRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQ 169
Query: 521 EASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 399
EA+EAYLVGLFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 170 EAAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 170 bits (413), Expect = 1e-42
Identities = 82/108 (75%), Positives = 92/108 (85%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSA 540
SAP G+KKPHR+ P VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQS+
Sbjct: 29 SAPMMAGLKKPHRFNPWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQSS 88
Query: 539 AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
A+ LQEA+E YLVGLFEDTNLC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 89 AMAVLQEAAETYLVGLFEDTNLCVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 130 bits (315), Expect = 8e-31
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 1/100 (1%)
Frame = -1
Query: 695 KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQE 519
+KPHR+RPGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQE
Sbjct: 45 RKPHRFRPGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQE 104
Query: 518 ASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 399
A+E +LV +FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 105 AAEYHLVDIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 107 bits (256), Expect = 1e-23
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -1
Query: 563 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 396
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 106
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -1
Query: 719 SAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRK 609
SAP+TGGVKKPHRY P R+Q L +++
Sbjct: 29 SAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAVLALQE 65
>09_04_0353 + 16915618-16916934
Length = 438
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 402 FTTDSSSKLNILRHDGHTFGVNSTQVGV 485
F DS+S +L ++ TFG NST+V V
Sbjct: 163 FYGDSASSAGVLANETFTFGTNSTRVAV 190
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 677 RPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV 498
RP V L + Y+ + EL + K F L R+ + + L FQS + E+Y+
Sbjct: 171 RPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDESYMP 230
Query: 497 G-LFEDTNLCA 468
+FE CA
Sbjct: 231 RCVFEPGTNCA 241
>01_06_0746 - 31636024-31641396
Length = 1790
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 254 YATMKYENDVFHQNSVIGLLAKPR 183
+ +++YENDV+ N GL +PR
Sbjct: 1035 FGSVQYENDVYPMNG--GLSQRPR 1056
Score = 22.6 bits (46), Expect(2) = 6.7
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 185 RYGHVILCKVH*SQKKPMD 129
+Y +V+ C+++ +QKK D
Sbjct: 1081 KYTYVVACQIYGNQKKAKD 1099
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 520 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 633
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,674,944
Number of Sequences: 37544
Number of extensions: 320285
Number of successful extensions: 746
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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