Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_J02
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...   221   3e-58
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...   169   2e-42
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...   157   6e-39
Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical p...   140   1e-33
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    98   7e-21
D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA...    33   0.28 
AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical ...    33   0.28 
Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical pr...    30   1.5  
DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping...    30   1.5  
AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    30   2.0  
Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical ...    28   6.0  
AL021386-3|CAA16167.1|  330|Caenorhabditis elegans Hypothetical ...    28   6.0  

>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score =  221 bits (541), Expect = 3e-58
 Identities = 103/192 (53%), Positives = 137/192 (71%)
 Frame = -1

Query: 738 VPVPVPQKRGAPVIFAEDEEYXRGNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXX 559
           VPV V  K+G  ++  +DEE+ + NF KFT L TVFQK+ GT+TA NASTLNDG      
Sbjct: 218 VPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTLNDGAAAVIV 275

Query: 558 XXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEA 379
                    ++KP+ARI+ + D    P+DF +AP +  PK+LE+ GV++ DVA WE+NEA
Sbjct: 276 ASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQSDVAQWEVNEA 335

Query: 378 FSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNG 199
           FS V +A  K LG+DPS +N HGGAVS+GHPIGMSGAR++ HL H LK G+ GVA+ICNG
Sbjct: 336 FSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKSGQIGVAAICNG 395

Query: 198 GGGASSVMIEKM 163
           GGG+S ++I+K+
Sbjct: 396 GGGSSGMVIQKL 407


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score =  169 bits (411), Expect = 2e-42
 Identities = 88/193 (45%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
 Frame = -1

Query: 738 VPVPVPQKRGAPVIFAEDEEYXRGNFXKFTKLSTVFQKEN-GTVTAGNASTLNDGXXXXX 562
           VPV V   R + V+  EDEEY +    K + L  VF ++  GT+T  NAS+LNDG     
Sbjct: 200 VPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDGAVATV 258

Query: 561 XXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINE 382
                   +    P+A +V FA+    PIDF +AP  A+  LL+K+G++  D+ALWE+NE
Sbjct: 259 VVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELNE 317

Query: 381 AFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
           AF+V  +A  K L ++PS +NV GGAV++GHP+GMSG RIV  L ++L  G+ GVA+ICN
Sbjct: 318 AFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLAPGQLGVAAICN 377

Query: 201 GGGGASSVMIEKM 163
           GGG A++V+I+K+
Sbjct: 378 GGGEATAVLIKKL 390


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score =  157 bits (382), Expect = 6e-39
 Identities = 76/192 (39%), Positives = 114/192 (59%)
 Frame = -1

Query: 738 VPVPVPQKRGAPVIFAEDEEYXRGNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXX 559
           V V V  K+G   +  +D    +    + +  S++     GT++  + +   DG      
Sbjct: 270 VAVNVKSKKGVEAVKQDDITKIK-KIKEGSVYSSIPIFPGGTISDKHIAAFTDGAAAVIL 328

Query: 558 XXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEA 379
                    N+KP+ARI+ + D     +DF +AP +  P LL+  GV + DVA WE+NEA
Sbjct: 329 ASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVNEA 388

Query: 378 FSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNG 199
           FS V +A  K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C+G
Sbjct: 389 FSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALCDG 448

Query: 198 GGGASSVMIEKM 163
            GG+S ++I+K+
Sbjct: 449 DGGSSGMVIQKL 460


>Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical
           protein F53A2.7 protein.
          Length = 394

 Score =  140 bits (338), Expect = 1e-33
 Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 2/180 (1%)
 Frame = -1

Query: 696 FAEDEEYXRGNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXAKRLNVKPI 517
           F  DE           KL  VFQK+ G V AGNAS ++DG            K  N+KP+
Sbjct: 216 FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISDGAAALVVAGEDSVKSKNLKPL 274

Query: 516 ARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL 337
           AR+V ++   CDP    I PA AI ++L+K+G++  D+ ++E+NEAF+  A+A Q+ LG+
Sbjct: 275 ARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKIGDIDIFEVNEAFAPQALAVQRELGI 334

Query: 336 DPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL--KKGEKGVASICNGGGGASSVMIEKM 163
              K+NV+GGA++LGHP+  SGARI  H+ H L  +  + G+ S C GGG   +++ EK+
Sbjct: 335 PMEKLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 70/208 (33%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
 Frame = -1

Query: 732 VPVPQKRGAPVIFAEDEEYXRGNFXKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXX 553
           VPV      P    ED         K + L   F K +GTVTA NAS L DG        
Sbjct: 237 VPVFLDGKKPKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMT 296

Query: 552 XXXAKRLNVKPIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEINEAF 376
              A     KP A +  +     DP D   ++PA  IPKLL+K G+  +DV ++EI+EAF
Sbjct: 297 EEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAF 356

Query: 375 SVVAVANQKLLGLD-----------------PSKINVHGGAVSLGHPIGMSGARIVVHLC 247
           +   +AN   +  D                   K+N+ GG++S+GHP G +G R+  H  
Sbjct: 357 AGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSA 416

Query: 246 HALK--KGEKGVASICNGGGGASSVMIE 169
           H LK  KG+  V + C  GG    ++IE
Sbjct: 417 HRLKEEKGQYAVIAACAAGGHGVGMLIE 444


>D86473-1|BAA20377.1|  412|Caenorhabditis elegans 3-keto-acyl-CoA
           thiolase protein.
          Length = 412

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 324 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
           IN  GG +S GHPIG +G    V L + L +G+ G   + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380


>AL023847-7|CAA19548.1|  412|Caenorhabditis elegans Hypothetical
           protein Y57A10C.6 protein.
          Length = 412

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 324 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 202
           IN  GG +S GHPIG +G    V L + L +G+ G   + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380


>Z82269-7|CAB05204.2|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428


>Z82269-6|CAB05206.3|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451


>DQ143943-1|AAZ73241.1|  770|Caenorhabditis elegans RNA-decapping
           protein protein.
          Length = 770

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412


>AL021488-8|CAJ43919.1|  786|Caenorhabditis elegans Hypothetical
           protein F52G2.1b protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428


>AL021488-7|CAJ43918.1|  809|Caenorhabditis elegans Hypothetical
           protein F52G2.1a protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 155 STYIFSIITDDAPPPPLQIEATPFSPFFK 241
           S+ IFS +    PPPP+  +ATP  P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -1

Query: 348 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 169
           +LGL   + +V    V+L + +   G    VH+  A +   KG   +  G GG+ S  +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407

Query: 168 K 166
           K
Sbjct: 408 K 408


>Z71180-3|CAA94892.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 319 CTWWSCQFGSSNWYVWSSHC 260
           C+WWS   G+SN Y   +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133


>AL021474-7|CAA16311.2|  763|Caenorhabditis elegans Hypothetical
           protein F22E12.1 protein.
          Length = 763

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 319 CTWWSCQFGSSNWYVWSSHC 260
           C+WWS   G+SN Y   +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133


>AL021386-3|CAA16167.1|  330|Caenorhabditis elegans Hypothetical
           protein F57E7.3 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 319 CTWWSCQFGSSNWYVWSSHCCTSV 248
           CTW    F S+ WY+ +SH  + +
Sbjct: 2   CTWRGSYFESAEWYLLASHLLSCI 25


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,476,219
Number of Sequences: 27780
Number of extensions: 323995
Number of successful extensions: 938
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)