Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_I22
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha... 163 1e-40
Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z68222-3|CAA92499.1| 253|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical p... 34 0.075
Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical p... 34 0.075
Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 25 4.4
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 25 4.4
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 28 6.5
>AC006608-6|AAF39753.1| 308|Caenorhabditis elegans Steroid alpha
reductase familyprotein 1 protein.
Length = 308
Score = 163 bits (396), Expect = 1e-40
Identities = 71/96 (73%), Positives = 79/96 (82%)
Frame = -2
Query: 639 GNLSIHILLKNLRPPGTKIXRIPKPDGNPFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAP 460
GNLSIHILL+NLRP GT+ RIPKPDGNP SLL N+VSCPNYTYE SW+FF+IM + P
Sbjct: 207 GNLSIHILLRNLRPAGTRERRIPKPDGNPLSLLFNYVSCPNYTYEVASWIFFSIMVQSLP 266
Query: 459 AGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKGRKA 352
A +F AGF QMA+WA GKHRNY KEFPDYPK RKA
Sbjct: 267 AIIFTTAGFAQMAIWAQGKHRNYLKEFPDYPKNRKA 302
>Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical
protein F42F12.3 protein.
Length = 243
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/89 (35%), Positives = 43/89 (48%)
Frame = -2
Query: 618 LLKNLRPPGTKIXRIPKPDGNPFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAA 439
+L LR PG +IP L ++SCPNY E W+ + I+ PA FA
Sbjct: 155 ILMTLRKPGETGYKIPT------GFLYEYISCPNYFGEIMEWIGYAILGWNLPALAFAIF 208
Query: 438 GFYQMAVWAIGKHRNYKKEFPDYPKGRKA 352
F + AI H YK++FP YP R+A
Sbjct: 209 TFANIGPRAIAHHNWYKEKFPKYPPTRRA 237
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = -2
Query: 555 PFSLLLNFVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFP 376
P L ++SCPNY E W+ ++I+ PA FA + A+ H+ YK+ FP
Sbjct: 170 PTGFLYEYISCPNYAGEIMEWIGYSILAWNLPALAFAIFTIANIGPRAVAHHKWYKETFP 229
Query: 375 DYPKGRK 355
YP R+
Sbjct: 230 GYPPNRR 236
>Z68222-3|CAA92499.1| 253|Caenorhabditis elegans Hypothetical
protein ZK1251.3 protein.
Length = 253
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 534 FVSCPNYTYEFGSWLFFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPD-YPKGR 358
++SCPNY E W+ + + + PA FA +A A+ H+ Y+K F + YP+ R
Sbjct: 186 YISCPNYFGECLQWIGYALAARSFPAIAFAFFIVCNLAPRAMSHHKWYQKMFGEQYPRDR 245
Query: 357 KA 352
A
Sbjct: 246 HA 247
>Z71178-13|CAF31498.1| 342|Caenorhabditis elegans Hypothetical
protein B0024.13b protein.
Length = 342
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -2
Query: 537 NFVSCPNYTYEFGSWL-FFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKG 361
N VSCP++ +E +L F ++ A+ H Y K FP YPK
Sbjct: 274 NLVSCPHFLFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKS 333
Query: 360 RKA 352
RKA
Sbjct: 334 RKA 336
>Z71178-11|CAA94885.2| 309|Caenorhabditis elegans Hypothetical
protein B0024.13a protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -2
Query: 537 NFVSCPNYTYEFGSWL-FFTIMTKCAPAGLFAAAGFYQMAVWAIGKHRNYKKEFPDYPKG 361
N VSCP++ +E +L F ++ A+ H Y K FP YPK
Sbjct: 241 NLVSCPHFLFEICIYLSLFLVIPDAYVYRFIIMFVCINQTFAALITHSWYHKTFPKYPKS 300
Query: 360 RKA 352
RKA
Sbjct: 301 RKA 303
>Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical
protein C24H11.8b protein.
Length = 676
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 212 ISNRYWLVPWWVSDDILEGSGFCLFWYATXWXGXXXXXXXKRTGSKER 69
IS WL WW + + +G+ +C +T G GS+E+
Sbjct: 505 ISGGAWLFSWWENWNGFDGAYYCFITLSTIGFGDIVPGQALDEGSQEK 552
>Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical
protein C24H11.8a protein.
Length = 653
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 212 ISNRYWLVPWWVSDDILEGSGFCLFWYATXWXGXXXXXXXKRTGSKER 69
IS WL WW + + +G+ +C +T G GS+E+
Sbjct: 505 ISGGAWLFSWWENWNGFDGAYYCFITLSTIGFGDIVPGQALDEGSQEK 552
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 154 LPSNMSSDTHQGTNQYLFDISKLSMSIF 237
L S + + QGT Q L+DIS + IF
Sbjct: 392 LYSKLLNPDSQGTQQSLYDISNTTARIF 419
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +1
Query: 355 FTAFGV--VWEFLLVVAMFT 408
+T +G VWEFL ++ +FT
Sbjct: 428 YTVYGPRRVWEFLCLLLLFT 447
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 24.6 bits (51), Expect(2) = 4.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 154 LPSNMSSDTHQGTNQYLFDISKLSMSIF 237
L S + + QGT Q L+DIS + IF
Sbjct: 392 LYSKLLNPDSQGTQQSLYDISNTTARIF 419
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 9/20 (45%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +1
Query: 355 FTAFGV--VWEFLLVVAMFT 408
+T +G VWEFL ++ +FT
Sbjct: 428 YTVYGPRRVWEFLCLLLLFT 447
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = -2
Query: 504 FGSWLFFTIMTKCAPAGLFAA--AGF-YQMAVWAIGKHRNYKK 385
FG+ FF K LF +G Y+ WA+GKHR K
Sbjct: 131 FGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAK 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,768,780
Number of Sequences: 27780
Number of extensions: 288739
Number of successful extensions: 720
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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