Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_I19
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical...   156   1e-38
AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical...   155   2e-38
AL034488-9|CAA22453.3|  134|Caenorhabditis elegans Hypothetical ...    52   2e-07
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z73422-2|CAA97765.1|  450|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>AL132948-41|CAC51075.1|  129|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3a protein.
          Length = 129

 Score =  156 bits (378), Expect = 1e-38
 Identities = 73/125 (58%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -2

Query: 484 ATVRAVKK--RILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRGCNGLSYTL 311
           AT + +K   ++  +RAAL LT  AV +++ ++ ++       LK+GVRQ+GCNGL+YTL
Sbjct: 7   ATAKVIKGALKVRQTRAALTLTNEAVSRIRVLLAQQNDAN--ALKIGVRQKGCNGLTYTL 64

Query: 310 DYAKTKEKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTCGCG 131
           +YAK K+K DEEV+QDG+ + I+ KAQL+LLG+EMDYV DKLS+EFVF NPNIKGTCGCG
Sbjct: 65  EYAKDKQKFDEEVEQDGIKVWIEPKAQLSLLGSEMDYVTDKLSSEFVFRNPNIKGTCGCG 124

Query: 130 EXFSI 116
           E FSI
Sbjct: 125 ESFSI 129


>AL132948-42|CAN86925.1|  131|Caenorhabditis elegans Hypothetical
           protein Y39B6A.3b protein.
          Length = 131

 Score =  155 bits (377), Expect = 2e-38
 Identities = 73/119 (61%), Positives = 93/119 (78%)
 Frame = -2

Query: 472 AVKKRILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRGCNGLSYTLDYAKTK 293
           A+K R    RAAL LT  AV +++ ++ ++       LK+GVRQ+GCNGL+YTL+YAK K
Sbjct: 15  ALKVRQTSFRAALTLTNEAVSRIRVLLAQQNDAN--ALKIGVRQKGCNGLTYTLEYAKDK 72

Query: 292 EKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTCGCGEXFSI 116
           +K DEEV+QDG+ + I+ KAQL+LLG+EMDYV DKLS+EFVF NPNIKGTCGCGE FSI
Sbjct: 73  QKFDEEVEQDGIKVWIEPKAQLSLLGSEMDYVTDKLSSEFVFRNPNIKGTCGCGESFSI 131


>AL034488-9|CAA22453.3|  134|Caenorhabditis elegans Hypothetical
           protein Y54G11A.9 protein.
          Length = 134

 Score = 52.4 bits (120), Expect = 2e-07
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
 Frame = -2

Query: 508 MTTKI--IASATVRAVKKRILPSRAALVLTPSAVKKVKEIMQKEEAKGYVGLKVGVRQRG 335
           +T KI  + + TV     R+L  +   V T  A  ++KE++   E      L++ V   G
Sbjct: 2   LTQKIGRLMACTVTRQAHRMLTEQEIKV-TNKAASRLKEVVDNGER-----LRLEVDGGG 55

Query: 334 CNGLSYT--LDYAKTKEKLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEF-VFN 164
           C+G  Y   LD     + L  +  ++G  I++D+ +   L G  +D+VED + + F + N
Sbjct: 56  CSGFEYKIRLDKKINNDDLLWKSSENGAEIVVDELSLGFLKGATVDFVEDLMKSSFRIVN 115

Query: 163 NPNIKGTCGCGEXFS 119
           NP  +  C CG  F+
Sbjct: 116 NPIAEKGCSCGSSFA 130


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 289 KLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTC 140
           K D + + DGV + I +K    ++ T  D        EF F N N    C
Sbjct: 65  KRDVDFESDGVKVQIREKRSTMVIVTRDDVTNSTTIREFAFQNVNTTERC 114


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
           protein C25G4.10 protein.
          Length = 1208

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 289 KLDEEVKQDGVTIIIDKKAQLTLLGTEMDYVEDKLSAEFVFNNPNIKGTC 140
           K D + + DGV + I +K    ++ T  D        EF F N N    C
Sbjct: 65  KRDVDFESDGVKVQIREKRSTMVIVTRDDVTNSTTIREFAFQNVNTTERC 114


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = -2

Query: 310 DYAKTKEKLDEEVKQDGVT---IIIDKKAQLTLLGTEMDYVEDKLSAEF 173
           DY +  EKL+E VK++ +    I+ ++  ++T L  +   +E K+S +F
Sbjct: 571 DYVRKIEKLEENVKEEQMNTEMIMKERTREITELYYQKRVLEKKISEQF 619


>Z73422-2|CAA97765.1|  450|Caenorhabditis elegans Hypothetical
           protein B0564.3 protein.
          Length = 450

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 375 FASSFCIISLTFFTADGVSTKAALEGNIRFFTARTVALAIIFVV 506
           F   + IIS+ + TA G S++   E  +R+F  R   + + FV+
Sbjct: 39  FLICYGIISVIYKTAMGESSQRTFESLVRYFDKRLSYIPLEFVL 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,902,742
Number of Sequences: 27780
Number of extensions: 193822
Number of successful extensions: 537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)