Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_I18
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.3
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 9.3
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 21 9.3
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 9.3
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 9.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.3
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 9.3
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELCHM 530
H G C + PG+F C M
Sbjct: 95 HDGSCLYVPPGIFKSTCKM 113
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELCHM 530
H G C + PG+F C M
Sbjct: 95 HDGSCLYVPPGIFKSTCKM 113
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 95 HNGSCLYVPPGIFKSTC 111
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 163 HNGSCLYVPPGIFKSTC 179
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 163 HNGSCLYVPPGIFKSTC 179
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 95 HDGSCLYVPPGIFKSTC 111
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 95 HDGSCLYVPPGIFKSTC 111
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 357 FILGRDLYWLFYYL 398
F+L +YW+FY L
Sbjct: 476 FMLFNAIYWIFYVL 489
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 586 HRGHCSPLSPGVFPELC 536
H G C + PG+F C
Sbjct: 95 HDGSCLYVPPGIFGSTC 111
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 592 SIHRGHCSPLSPGVF 548
S+H + SPLS G+F
Sbjct: 214 SVHYHYLSPLSAGLF 228
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 592 SIHRGHCSPLSPGVF 548
S+H + SPLS G+F
Sbjct: 85 SVHYHYLSPLSAGLF 99
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 306 ISNQETTYIV**NNIVDLVRNL 241
+ N E Y++ NN++D+ +++
Sbjct: 521 VGNHEDGYLIGVNNLIDIFQDI 542
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 306 ISNQETTYIV**NNIVDLVRNL 241
+ N E Y++ NN++D+ +++
Sbjct: 436 VGNHEDGYLIGVNNLIDIFQDI 457
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/22 (27%), Positives = 15/22 (68%)
Frame = -3
Query: 306 ISNQETTYIV**NNIVDLVRNL 241
+ N E Y++ NN++D+ +++
Sbjct: 755 VGNHEDGYLIGVNNLIDIFQDI 776
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 592 SIHRGHCSPLSPGVF 548
S+H + SPLS G+F
Sbjct: 214 SVHYHYLSPLSAGLF 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,023
Number of Sequences: 438
Number of extensions: 3572
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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