Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_I11
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0300 - 3257584-3258825 34 0.13
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 33 0.17
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 33 0.17
10_02_0198 - 6611775-6612611 33 0.17
07_01_1086 - 9930311-9931993 33 0.17
05_03_0216 + 10370531-10371922,10378656-10378808 33 0.17
04_01_0187 - 2153546-2154520,2154581-2155858 33 0.17
12_02_0637 - 21437244-21438080 33 0.23
08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417 33 0.23
12_02_0214 + 15750620-15751273 32 0.53
08_01_0749 + 7063297-7064370 32 0.53
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 32 0.53
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 31 0.70
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 31 0.92
03_05_0186 + 21731294-21732277 31 0.92
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 31 1.2
08_02_0235 + 14627648-14628889 30 1.6
10_04_0010 - 7487455-7489490,7489569-7489980 29 2.8
06_02_0319 + 14306464-14306577,14306623-14307117 29 2.8
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 29 4.9
11_03_0201 + 11578163-11578915 28 6.5
09_02_0555 - 10588685-10592038 28 6.5
07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188 28 8.6
>10_01_0300 - 3257584-3258825
Length = 413
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T F T KL P+F+GPY+IV + + Y +E
Sbjct: 262 FEEGDYVYLRVTPLRGVHHFHTNGKLAPRFVGPYKIVSRRGEVAYQLE 309
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 430 FEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 477
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 173 FEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 220
>10_02_0198 - 6611775-6612611
Length = 278
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 127 FEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 174
>07_01_1086 - 9930311-9931993
Length = 560
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKTQ------FGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T F T KL P+F+GPY+IV+ + + Y +E
Sbjct: 409 FEEGDYVYLRVTPLRGVHCFHTKGKLAPRFVGPYKIVRRRGEVAYQLE 456
>05_03_0216 + 10370531-10371922,10378656-10378808
Length = 514
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 395 FEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 442
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 645 FEEGDYVYLRVTPIRGVHRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 692
>12_02_0637 - 21437244-21438080
Length = 278
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 127 FEEGDYVYLRVTPLRGVHRFHTMGKLAPRFVGPYKIVSRRGEVAYQLE 174
>08_01_0732 - 6672839-6672937,6672990-6673571,6673755-6674417
Length = 447
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 334 FEEGDYVYLRVTPFRGVHRFHTKGKLAPRFVGPYKIVSRRVEVAYQLE 381
>12_02_0214 + 15750620-15751273
Length = 217
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GP++IV + + Y +E
Sbjct: 66 FEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLE 113
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GP++IV + + Y +E
Sbjct: 206 FEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLE 253
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GP++IV + + Y +E
Sbjct: 1525 FEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLE 1572
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++EGD V ++ T +F T KL P+F+GP++IV + + Y +E
Sbjct: 681 FEEGDYVYLQVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLE 728
>08_02_0167 - 13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -2
Query: 666 QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
+F T KL P+++GP+RI+ +R+ Y +E
Sbjct: 1034 RFQTKGKLAPRYVGPFRIIARRREVAYQLE 1063
>03_05_0186 + 21731294-21732277
Length = 327
Score = 31.1 bits (67), Expect = 0.92
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
+++GD V ++ T +F T KL P+F+GPY+IV + + Y +E
Sbjct: 262 FEKGDHVYLRVTPLRGVYRFHTKGKLAPRFVGPYKIVSRRGEVAYQLE 309
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKT------QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
++ GD V ++ T +F T KL P+F+GPY+I++ + + Y +E
Sbjct: 348 FEAGDYVYLRVTPLRRVHRFQTKGKLAPRFMGPYKILERRGEVAYQLE 395
>08_02_0235 + 14627648-14628889
Length = 413
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = -2
Query: 702 YKEGDLVAVKKTQF-GTGM-----KLKPKFLGPYRIVKVKRKNRYNVE 577
+ EGD V ++ T F G KL P+F+GPY+IV + + Y +E
Sbjct: 262 FDEGDYVYLRVTPFRGVHRFHIKGKLAPRFVGPYKIVSRRGEVAYQLE 309
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 666 QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
+F T KL P+F+GP+RI+ + + Y +E
Sbjct: 727 RFQTKGKLAPRFVGPFRIIARRGEVAYQLE 756
>06_02_0319 + 14306464-14306577,14306623-14307117
Length = 202
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 666 QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
+F T KL P+F+GP+RI+ + + Y +E
Sbjct: 69 RFQTKGKLPPRFVGPFRIIARRGEVAYQLE 98
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 109 TNINLHPSYHAFNKTSFPHSAVLHVSLSSELPFYNTNILKHRESY 243
T + HP H F + PH++ + L S + +++++ + SY
Sbjct: 448 TELKRHPEIHNFEQNLLPHNSAPYFGLPSGIVPFSSSVPRDYTSY 492
>11_03_0201 + 11578163-11578915
Length = 250
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 648 KLKPKFLGPYRIVKVKRKNRYNVE 577
KL P+F+GPY+I++ + + Y +E
Sbjct: 123 KLAPRFVGPYKILEQRGEVAYQLE 146
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 666 QFGTGMKLKPKFLGPYRIVKVKRKNRYNVE 577
+F T KL P+++GP+RI+ + + Y +E
Sbjct: 984 RFQTKGKLAPRYVGPFRIIARRGEVAYQLE 1013
>07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188
Length = 736
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 693 GDLVAVKKTQFGTGMKLKPKFLGPYRIVKVKRKNRYNVEKAD 568
GDLV K KL P + GP+ I +V R Y +++ D
Sbjct: 677 GDLVLRKIQTTQDRHKLSPLWEGPFIIAEVTRPGSYRLKRED 718
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,774,789
Number of Sequences: 37544
Number of extensions: 230698
Number of successful extensions: 506
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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