Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_I10
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC080593-1|AAH80593.1| 449|Homo sapiens SAMD8 protein protein. 46 1e-04
AL392111-3|CAI40906.1| 478|Homo sapiens sterile alpha motif dom... 46 1e-04
X17033-1|CAA34894.1| 1181|Homo sapiens protein ( Human mRNA for ... 33 0.46
AF512556-1|AAM34795.1| 1181|Homo sapiens integrin, alpha 2 (CD49... 33 0.46
U63131-1|AAB04798.1| 378|Homo sapiens CDC37 homolog protein. 29 7.5
U43077-1|AAB63979.1| 378|Homo sapiens CDC37 homolog protein. 29 7.5
CR542249-1|CAG47045.1| 378|Homo sapiens CDC37 protein. 29 7.5
BT006796-1|AAP35442.1| 378|Homo sapiens CDC37 cell division cyc... 29 7.5
BC008793-1|AAH08793.1| 378|Homo sapiens cell division cycle 37 ... 29 7.5
BC000083-1|AAH00083.1| 378|Homo sapiens cell division cycle 37 ... 29 7.5
AY864824-1|AAW34362.1| 378|Homo sapiens CDC37 cell division cyc... 29 7.5
BC041369-1|AAH41369.1| 365|Homo sapiens sphingomyelin synthase ... 29 9.9
BC028705-1|AAH28705.1| 365|Homo sapiens MGC26963 protein protein. 29 9.9
>BC080593-1|AAH80593.1| 449|Homo sapiens SAMD8 protein protein.
Length = 449
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 495 SSRTRIWFPLLSFFESEVDGIVPNEYEGP 409
S R RIWFP+ SFFE V+G VPNEY P
Sbjct: 409 SRRARIWFPMFSFFECNVNGTVPNEYCWP 437
>AL392111-3|CAI40906.1| 478|Homo sapiens sterile alpha motif domain
containing 8 protein.
Length = 478
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3
Query: 495 SSRTRIWFPLLSFFESEVDGIVPNEYEGP 409
S R RIWFP+ SFFE V+G VPNEY P
Sbjct: 438 SRRARIWFPMFSFFECNVNGTVPNEYCWP 466
>X17033-1|CAA34894.1| 1181|Homo sapiens protein ( Human mRNA for
integrin alpha-2 subunit. ).
Length = 1181
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/91 (30%), Positives = 41/91 (45%)
Frame = +2
Query: 80 KIGDGGSPNSFRSESFGSSMFL*RNSWSEHSSSKQACMFLSSVTSRGREFLNSSTRLRFL 259
KIG S SF+SE+F + L + S S C +L V +G F+N +TR+
Sbjct: 1027 KIGQTSSSVSFKSENFRHTKEL---NCRTASCSNVTC-WLKDVHMKGEYFVNVTTRIWNG 1082
Query: 260 LMPSTILTTEYSPIAAPSCSFEPAILATEDS 352
S+ T AA ++ P I ED+
Sbjct: 1083 TFASSTFQTVQLTAAAEINTYNPEIYVIEDN 1113
>AF512556-1|AAM34795.1| 1181|Homo sapiens integrin, alpha 2 (CD49B,
alpha 2 subunit of VLA-2 receptor) protein.
Length = 1181
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/91 (30%), Positives = 41/91 (45%)
Frame = +2
Query: 80 KIGDGGSPNSFRSESFGSSMFL*RNSWSEHSSSKQACMFLSSVTSRGREFLNSSTRLRFL 259
KIG S SF+SE+F + L + S S C +L V +G F+N +TR+
Sbjct: 1027 KIGQTSSSVSFKSENFRHTKEL---NCRTASCSNVTC-WLKDVHMKGEYFVNVTTRIWNG 1082
Query: 260 LMPSTILTTEYSPIAAPSCSFEPAILATEDS 352
S+ T AA ++ P I ED+
Sbjct: 1083 TFASSTFQTVQLTAAAEINTYNPEIYVIEDN 1113
>U63131-1|AAB04798.1| 378|Homo sapiens CDC37 homolog protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>U43077-1|AAB63979.1| 378|Homo sapiens CDC37 homolog protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>CR542249-1|CAG47045.1| 378|Homo sapiens CDC37 protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>BT006796-1|AAP35442.1| 378|Homo sapiens CDC37 cell division cycle
37 homolog (S. cerevisiae) protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>BC008793-1|AAH08793.1| 378|Homo sapiens cell division cycle 37
homolog (S. cerevisiae) protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>BC000083-1|AAH00083.1| 378|Homo sapiens cell division cycle 37
homolog (S. cerevisiae) protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>AY864824-1|AAW34362.1| 378|Homo sapiens CDC37 cell division cycle
37 homolog (S. cerevisiae) protein.
Length = 378
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 63 FIYFFSKLATVDRRILFGANPLEVQCFCDVIRGQSTRPVNK 185
F FF+K+ T DR+ + G N E++ F + +RG++ + K
Sbjct: 234 FRQFFTKIKTADRQYMEGFND-ELEAFKERVRGRAKLRIEK 273
>BC041369-1|AAH41369.1| 365|Homo sapiens sphingomyelin synthase 2
protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 477 WFPLLSFFESEVDGIVPNEYEGPVT 403
WFP+ FFE V G +P + P++
Sbjct: 314 WFPIFYFFEKNVQGSIPCCFSWPLS 338
>BC028705-1|AAH28705.1| 365|Homo sapiens MGC26963 protein protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 477 WFPLLSFFESEVDGIVPNEYEGPVT 403
WFP+ FFE V G +P + P++
Sbjct: 314 WFPIFYFFEKNVQGSIPCCFSWPLS 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,789,213
Number of Sequences: 237096
Number of extensions: 1529899
Number of successful extensions: 4564
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4562
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -