Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_I10
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    32   0.22 
Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z95619-2|CAB09114.1|  450|Caenorhabditis elegans Hypothetical pr...    31   0.38 
Z82069-2|CAB04904.1|  315|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical ...    29   1.5  
AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF016447-3|AAG24018.1|  349|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    29   2.7  
Z48544-4|CAA88443.3|  250|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z93396-2|CAB07711.1|  343|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AC006638-8|AAK85487.2|  644|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF098992-8|AAC67454.2|  239|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 489 RTRIWFPLLSFFESEVDGIVPNEYEGPVTI 400
           R R WFPL  FFE    G V NE+  P+ I
Sbjct: 408 RMRTWFPLGWFFEYGSQGKVENEFSLPINI 437


>Z95619-3|CAB54269.1|  490|Caenorhabditis elegans Hypothetical
           protein H21P03.3b protein.
          Length = 490

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 477 WFPLLSFFESEVDGIVPNEYEGPVTIMQ 394
           WFPLL +FE ++   VP  ++ P++  Q
Sbjct: 420 WFPLLRWFEGDIRRPVPRRFDCPISYSQ 447


>Z95619-2|CAB09114.1|  450|Caenorhabditis elegans Hypothetical
           protein H21P03.3a protein.
          Length = 450

 Score = 31.5 bits (68), Expect = 0.38
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 477 WFPLLSFFESEVDGIVPNEYEGPVTIMQ 394
           WFPLL +FE ++   VP  ++ P++  Q
Sbjct: 380 WFPLLRWFEGDIRRPVPRRFDCPISYSQ 407


>Z82069-2|CAB04904.1|  315|Caenorhabditis elegans Hypothetical
           protein W04A8.3 protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 173 SSKQACMFLSSVTSRGREFLNSSTRLRFLLMPSTIL 280
           SSKQA  FL  +  +GR    S+T ++  L+PS ++
Sbjct: 198 SSKQANKFLKKLKEKGRLMSFSATNMKSSLVPSAVV 233


>AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical
           protein F53C3.6a protein.
          Length = 250

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +2

Query: 86  GDGGSPNSFRSESFGSSMFL*RNSWSEHSSSKQACMFLSSVTSRGREFLNSSTRLRFLLM 265
           G GG    FRS    SS    R   S +SSS +  +F +S TSR   F +  TR   ++ 
Sbjct: 50  GRGGGGGGFRSGGARSSFSSFRGGSSHYSSSFRQNVFHTSSTSRTFVF-SPMTRTIVIIS 108

Query: 266 PSTILTTE 289
           P++ +  E
Sbjct: 109 PASPMIYE 116


>AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical
           protein T10D4.6 protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 263 MPSTILTTEYSPIAAPSCSFEPAILATEDS 352
           +P T+  +   P+A+ SCS  PA+LA+ D+
Sbjct: 614 LPPTVDVSSPPPVASSSCSPYPALLASADA 643


>AF016447-3|AAG24018.1|  349|Caenorhabditis elegans Hypothetical
           protein C54F6.8 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 42  IITYKTYFIYFFSKLATVDRRILFGANPLEVQCFCDVIRG 161
           II Y T F +F  KL   D+  LF AN      FC  +RG
Sbjct: 165 IIEYFTSF-HFIDKLNNDDKMKLFQANSFRSNIFCGGMRG 203


>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 396 QNLKQWCVQMVADVKESSVAKIAGSKLQEGAAMGEYSVV--RIVDGIK-RNLSLVEE 235
           + ++ W V ++A  +  ++A   G +  EGA  G+ +++  R VDG +   L LV+E
Sbjct: 118 KKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKE 174


>Z48544-4|CAA88443.3|  250|Caenorhabditis elegans Hypothetical
           protein ZK945.5 protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 183 CLLDECSDH-ELRHRNIELPKDSLRK 109
           C LD+CSDH E  H ++ L    LR+
Sbjct: 181 CFLDKCSDHFEHEHSSLHLELPELRR 206


>Z93396-2|CAB07711.1|  343|Caenorhabditis elegans Hypothetical
           protein ZC15.3 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 THHCFKFCIMVTGPSYSLGTIPSTSD 451
           THH   FC+M+T   Y L    S SD
Sbjct: 297 THHNATFCLMLTSKQYKLERKGSPSD 322


>AC006638-8|AAK85487.2|  644|Caenorhabditis elegans Hypothetical
           protein F41G4.7 protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 374 THHCFKFCIMVTGPSYSLGTIPSTSD 451
           THH   FC+M+T   Y L    S SD
Sbjct: 589 THHNATFCLMLTSKQYKLERKGSPSD 614


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = +3

Query: 42  IITYKTYFIYF--FSKLATVDRRILFGANPLEVQCFCDVIR 158
           I ++ +YF+ F   ++L  +D++I+F    L++  FC V+R
Sbjct: 164 IYSHISYFLNFDFVNELHDIDKKIIFQHTILKLTYFCGVMR 204


>AF098992-8|AAC67454.2|  239|Caenorhabditis elegans Hypothetical
           protein F53C3.3 protein.
          Length = 239

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 83  IGDGGSPNSFRSESFGSSMFL*RNSWSEHSSSKQACMFLSSVTSRGREFLNSSTRLRFLL 262
           +G  G   SFRS    SS    R   S +SSS +  +F +S T++   + +  TR   ++
Sbjct: 38  VGGRGGGGSFRSGGARSSSSSFRGGSSHYSSSFRQNVFHTSSTAKTFAY-SPMTRTHLII 96

Query: 263 MPST 274
            P++
Sbjct: 97  SPAS 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,931
Number of Sequences: 27780
Number of extensions: 252345
Number of successful extensions: 855
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)