Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_I09
         (311 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003...    27   3.1  

>02_05_0046 - 25398412-25398594,25399022-25399060,25399896-25400360,
            25400758-25400816,25400920-25401748,25402554-25402898,
            25402973-25403435,25403537-25403640,25403692-25403901,
            25404933-25405088,25405774-25406052,25406237-25406986,
            25407141-25407232,25407977-25408361,25408672-25408752,
            25409196-25409354,25409399-25409506,25409604-25409666,
            25409764-25409835,25409932-25410366
          Length = 1758

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 196  NLINLFLNDSSSCLKLIVTDH 258
            N+ +L+LN+SSSC +L+   H
Sbjct: 1425 NMSSLYLNNSSSCRRLLSESH 1445


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,948,342
Number of Sequences: 37544
Number of extensions: 42444
Number of successful extensions: 65
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)