Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_I08
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   427   e-120
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   426   e-119
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   425   e-119
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   425   e-119
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   316   1e-86
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   7.9  

>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  427 bits (1051), Expect = e-120
 Identities = 193/225 (85%), Positives = 207/225 (92%), Gaps = 1/225 (0%)
 Frame = -1

Query: 686 WCHFVK-ITMGRRPARXYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVH 510
           W   V  + MGRRPAR YRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVH
Sbjct: 11  WKRLVSGVEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVH 70

Query: 509 LVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 330
           LVSDEYEQLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRL
Sbjct: 71  LVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRL 130

Query: 329 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKW 150
           QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKW
Sbjct: 131 QTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKW 190

Query: 149 GFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 15
           GFTKYER+ +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 191 GFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 235


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  426 bits (1050), Expect = e-119
 Identities = 191/218 (87%), Positives = 205/218 (94%)
 Frame = -1

Query: 668 ITMGRRPARXYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 489
           + MGRRPAR YRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYE
Sbjct: 12  VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 71

Query: 488 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 309
           QLSSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA
Sbjct: 72  QLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 131

Query: 308 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 129
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 132 FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 191

Query: 128 DEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 15
           + +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 192 ERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 229


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  425 bits (1048), Expect = e-119
 Identities = 191/216 (88%), Positives = 204/216 (94%)
 Frame = -1

Query: 662 MGRRPARXYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 483
           MGRRPAR YRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 482 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 303
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 302 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 123
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 122 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 15
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  425 bits (1048), Expect = e-119
 Identities = 191/216 (88%), Positives = 204/216 (94%)
 Frame = -1

Query: 662 MGRRPARXYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 483
           MGRRPAR YRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 482 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 303
           SSEALEAGRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120

Query: 302 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDE 123
           KPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ 
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERER 180

Query: 122 FEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 15
           +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 181 YEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  316 bits (777), Expect = 1e-86
 Identities = 154/218 (70%), Positives = 171/218 (78%)
 Frame = -1

Query: 668 ITMGRRPARXYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYE 489
           + MGRRPAR YRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+A V+DFPLCVHLVSDEYE
Sbjct: 5   VEMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYE 64

Query: 488 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGA 309
           QLSSEALEAGRICCNK ++   G D+    MR                          GA
Sbjct: 65  QLSSEALEAGRICCNK-MLSCAGADRLQTGMR--------------------------GA 97

Query: 308 FGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 129
           FGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER
Sbjct: 98  FGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER 157

Query: 128 DEFEKLREEGRLANDGCIVQYRPEHGPLDAWRKVQAEI 15
           + +E+LR++ RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 158 ERYEELRDDNRLEPDGCNVKYRPEHGPIAAWEKAQRDV 195


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 464 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 604
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,474,302
Number of Sequences: 53049
Number of extensions: 829594
Number of successful extensions: 2689
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2688
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)