Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H21
         (490 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot...    29   8.6  
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c...    29   8.6  
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr...    29   8.6  

>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 protein.
          Length = 4967

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4459 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4490


>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
            (cardiac) protein.
          Length = 4965

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4457 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4488


>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
            protein.
          Length = 4967

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 114  RDRLRKLHRTIYNEGKITSSSFYYKYMIYKKK 209
            + +LR+LH   Y E ++  S+F+ K + Y++K
Sbjct: 4459 KQKLRQLHTHRYGEPEVPESAFWKKIIAYQQK 4490


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,715,505
Number of Sequences: 237096
Number of extensions: 981012
Number of successful extensions: 1548
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)